BS22019.complete Sequence
881 bp assembled on 2011-01-31
GenBank Submission: KX803764
> BS22019.complete
GAAGTTATCAGTCGACATGGATGGCGCAAAGGCAGAAGTATTCAGTGTTT
CCGTAGATACCAAGATGGGCGCCTTTAAAAATTCCCTGCTGCTGCTGACA
CTTCTGCTAGCCATCCATTTGGAGGCATCCAAGATAGTCTACAAGAAGCC
GCTCTATGGCAATAGCAACATCATCAAGGACAAGCGTATAAAGACGAAGC
CCGTCAAACTGGAAACCAGCACCATGAGCAGCACTGGTGTTGCAAGTAGC
AGCACAACAGCCGAAGAGGATTGGCCCACGGCCGTTGAGTTTGTGATTAT
GACAACGCCCGCAAGCGAATTGGAAGCCAGCACGGAAACCATTGGTAACA
ATGGCACCACCGAAACGACCGTTGGCGAGGCACCCATCATCGGATCGTCG
GAAGGATCCACACGATCGATGGAGCCAACCACCGCGAGTCCGCTGATGAG
CACAAACCCATCGAGCAGCAGCAGTCTGGTTAGCACCATTCCCTTGCCAC
CGACAGCGGGACTGCCTGTGCAGGATAATCAGCCAGTGCCGTGCACATGC
GGCGTCTTCCTCTCCTCGCAAATCCCAAATGGCTTGCCGACAAAGCCACT
TATCCACCAGGAATTGGATCATATGTTTCCCTGCAATGCCATCGGTCGCA
AGCAGTGTCAAACCAAATGCCTAGAGACGATCGTACAACATCTGCCGAAT
TCCGCAAATATAGTATGCTCCGCACTGGGTCACGATTGTCACAAGGAACG
GGCCTATTTGTTCATCAAGAACTGTCACAATCAATGGGTTAATACCAATC
TGCAGGCGGGCAGGGAGTACTGTTGTCGCTCTGGCGTTCCCTACCGTTGC
CCATTGATGGGTTAAAAGCTTTCTAGACCAT
BS22019.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 22:36:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fcp3C-RA | 849 | CG4015-PA | 1..849 | 17..865 | 4245 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:36:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fcp3C-RA | 963 | CG4015-RA | 81..929 | 17..865 | 4245 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 22:36:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3173668..3174279 | 679..68 | 3060 | 100 | Minus |
| X | 23542271 | X | 3173410..3173596 | 865..679 | 935 | 100 | Minus |
| X | 23542271 | X | 3174342..3174394 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 22:36:08 has no hits.
BS22019.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:52 Download gff for
BS22019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 1112..1958 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:03:16 Download gff for
BS22019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 81..927 | 17..863 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 23:05:27 Download gff for
BS22019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Fcp3C-RA | 81..927 | 17..863 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 23:05:27 Download gff for
BS22019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3173412..3173595 | 680..863 | 100 | <- | Minus |
| X | 3173668..3174278 | 69..679 | 100 | <- | Minus |
| X | 3174343..3174394 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:03:16 Download gff for
BS22019.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3067445..3067628 | 680..863 | 100 | <- | Minus |
| arm_X | 3067701..3068311 | 69..679 | 100 | <- | Minus |
| arm_X | 3068376..3068427 | 17..68 | 100 | | Minus |
BS22019.pep Sequence
Translation from 16 to 864
> BS22019.pep
MDGAKAEVFSVSVDTKMGAFKNSLLLLTLLLAIHLEASKIVYKKPLYGNS
NIIKDKRIKTKPVKLETSTMSSTGVASSSTTAEEDWPTAVEFVIMTTPAS
ELEASTETIGNNGTTETTVGEAPIIGSSEGSTRSMEPTTASPLMSTNPSS
SSSLVSTIPLPPTAGLPVQDNQPVPCTCGVFLSSQIPNGLPTKPLIHQEL
DHMFPCNAIGRKQCQTKCLETIVQHLPNSANIVCSALGHDCHKERAYLFI
KNCHNQWVNTNLQAGREYCCRSGVPYRCPLMG*
BS22019.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:04:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Fcp3C-PA | 282 | CG4015-PA | 1..282 | 1..282 | 1478 | 100 | Plus |
