BS22041.complete Sequence
1349 bp assembled on 2011-01-25
GenBank Submission: KX801286
> BS22041.complete
GAAGTTATCAGTCGACATGGCATCTGTTGTAGCTGATCTTCCGTCTTATG
GACCTATCGCTTTTGATCAGGTGGATAACAACACGAACGCGACCCAGCTA
TTCAAAAATAATATAAACAAAACCAGAATGAACGATTTAAACCGCGAGGA
GACGCGATTAAAGACCTTCACCGACTGGCCGCTGGACTGGCTGGATAAAC
GCCAATTGGCCCAAACCGGCATGTACTTCACACACGCCGGCGACAAAGTT
AAATGCTTTTTCTGCGGCGTGGAAATCGGTTGCTGGGAGCAGGAGGATCA
GCCCGTGCCGGAACATCAGCGATGGTCGCCCAACTGTCCACTGTTGCGCC
GGCGCACTACCAACAATGTGCCGATCAATGCCGAAGCATTAGATCGCATC
CTGCCGCCAATAAGCTACGATATCTGCGGCGCCAACGACTCGACGCTGGA
GATGAGGGAGCATGCCTACGCAGAAGGCGTCATACCCATGTCGCAACTAA
TTCAGTCGATTGGCATGAATGCAGTAAATGCGGCAGGCAGTGTAACTGGA
ACCGCAGCCCCGCAGCCGAGGGTAACGGTCGCCACCCATGCGTCGACGGC
GACACAGGCCACTGGCGATGTCCAGCCGGAGACGTGTCGTCCTTCAGCCG
CCAGTGGCAATTATTTTCCCCAGTATCCCGAATACGCCATCGAGACGGCA
CGCCTGCGCACCTTCGAGGCTTGGCCGAGGAACCTGAAACAGAAGCCCCA
CCAGCTGGCCGAGGCGGGTTTCTTCTATACAGGCGTTGGGGATCGCGTCC
GCTGCTTCAGTTGCGGCGGTGGTCTCATGGATTGGAACGACAACGACGAG
CCCTGGGAACAGCACGCTCTCTGGCTAAGTCAGTGCCGATTCGTCAAGCT
GATGAAGGGTCAGCTCTATATCGATACGGTGGCCGCCAAACCAGTGCTGG
CCGAGGAGAAGGAGGAGAGCTCTTCGATTGGAGGGGTCGCGGTGGCCAGC
ACACAGGCTTCAGAGGAAGAGCAGCAGACATCACTCTCATCGGAGGAGGC
CGTTTCGGGGGATGTGGCTCCGTCCGTAGCTCCCACGGCAGCCACACGCA
TCTTCAACAAGATCGTCGAGGCGACAGCGGTGGCTACTCCCTCGACAAAC
AGCAGCGGCTCCACCTCCATACCCGAGGAAAAGTTGTGCAAGATCTGCTA
CGGCGCCGAGTACAATACGGCATTCCTGCCATGCGGTCATGTGGTGGCCT
GCGCCAAGTGCGCCTCCTCTGTGACAAAGTGTCCGCTGTGCCGGAAGCCC
TTCACCGATGTGATGCGCGTATATTTTTCTTAAAAGCTTTCTAGACCAT
BS22041.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:16:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap1-RF | 1317 | CG12284-PF | 1..1317 | 17..1333 | 6570 | 99.9 | Plus |
| Diap1-RE | 1317 | CG12284-PE | 1..1317 | 17..1333 | 6570 | 99.9 | Plus |
| Diap1-RD | 1317 | CG12284-PD | 1..1317 | 17..1333 | 6570 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:16:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap1-RF | 2233 | CG12284-RF | 655..1971 | 17..1333 | 6570 | 99.9 | Plus |
| Diap1-RE | 2304 | CG12284-RE | 726..2042 | 17..1333 | 6570 | 99.9 | Plus |
| Diap1-RD | 1754 | CG12284-RD | 176..1492 | 17..1333 | 6570 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:16:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16038672..16039988 | 1333..17 | 6570 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:16:38 has no hits.
BS22041.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:19 Download gff for
BS22041.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| th-RC | 237..1551 | 17..1331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:50:43 Download gff for
BS22041.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| th-RD | 176..1490 | 17..1331 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:10:06 Download gff for
BS22041.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Diap1-RD | 176..1490 | 17..1331 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:10:06 Download gff for
BS22041.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16038674..16039988 | 17..1331 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:50:43 Download gff for
BS22041.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16031774..16033088 | 17..1331 | 99 | | Minus |
BS22041.pep Sequence
Translation from 16 to 1332
> BS22041.pep
MASVVADLPSYGPIAFDQVDNNTNATQLFKNNINKTRMNDLNREETRLKT
FTDWPLDWLDKRQLAQTGMYFTHAGDKVKCFFCGVEIGCWEQEDQPVPEH
QRWSPNCPLLRRRTTNNVPINAEALDRILPPISYDICGANDSTLEMREHA
YAEGVIPMSQLIQSIGMNAVNAAGSVTGTAAPQPRVTVATHASTATQATG
DVQPETCRPSAASGNYFPQYPEYAIETARLRTFEAWPRNLKQKPHQLAEA
GFFYTGVGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQCRFVKLMKGQL
YIDTVAAKPVLAEEKEESSSIGGVAVASTQASEEEQQTSLSSEEAVSGDV
APSVAPTAATRIFNKIVEATAVATPSTNSSGSTSIPEEKLCKICYGAEYN
TAFLPCGHVVACAKCASSVTKCPLCRKPFTDVMRVYFS*
BS22041.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Diap1-PF | 438 | CG12284-PF | 1..438 | 1..438 | 2335 | 100 | Plus |
| Diap1-PE | 438 | CG12284-PE | 1..438 | 1..438 | 2335 | 100 | Plus |
| Diap1-PD | 438 | CG12284-PD | 1..438 | 1..438 | 2335 | 100 | Plus |
| Diap1-PC | 438 | CG12284-PC | 1..438 | 1..438 | 2335 | 100 | Plus |
| Diap1-PA | 438 | CG12284-PA | 1..438 | 1..438 | 2335 | 100 | Plus |
