BS22050.complete Sequence
1046 bp assembled on 2011-01-25
GenBank Submission: KX803648
> BS22050.complete
GAAGTTATCAGTCGACATGTTTGACAACGCGATTAAACCTCATCCGGAGG
CCAATGGAGCTCCAATAAATGCAGGAGATCGGCCGATAACTACTGTCATT
AATATTGAACCAGAACCAGAAACCGAAAGTCCAATTGGGATCTTCACATC
ACAACCGGAAAGTCAACAACAACAACCCGAGCAGCTCCAATCCGAATCCG
AGTCCGACAGAATGGCCAATTTTGACGATACGTTGCAACGCGCCCGCCTT
GCCTTTTCCAGTGGAAAGACCAGGAATGTCAGCTTTCGACGCAAGCAGCT
GGAGAATTTGCTGCGTTGCTATGAGGAGCACGAGAACGAGATCATCAGCG
CCTTGGAGGCGGATCTGCGACGTCCCAAGCAGGAGAGCCTCATCGTGGAA
ACGGAATTCATGAAGAACGACATCAGGCACATCCTATTCCAGCTCGACGA
GTGGGTGCAGTCGGAGAAGCCGCCCAAGTCGTTTGTGAACATGATGGACG
ACGTCCAGATCTACAATGACCCCTTCGGAGTGGTTCTGGTGATCGGCGCC
TGGAACTACCCGCTGCAGCTGCTGCTCGTGCCAGTGGCTTCCGCCATCGC
CGCCGGAAACTGTGTGGTGATCAAGCCCAGCGAGATTGCCGCCAACTGCG
CCAAGTTCATTGCCGATGTCATTCCAAAATATTTGGATAATGATTGCTAT
CCAGTTGTCTGCGGTGGACCCAGCGAAACGGCGGAGCTGCTCAACCAGCG
TTTCGACTACATCTTCTACACGGGCTCCACGCGCGTAGGCAAGATTATCC
ACGCCGCGGCCAACAAGTACTTGACCCCCACCACCTTGGAGCTGGGTGGC
AAAAGCCCCTGCTACATTGACAAATCTGTGGACATGCGCACTGCGGTCAA
GCGCATCCTGTGGGGCAAGCTGATTAACTGCGGACAGACCTGCATCGCTC
CGGACTACATCCTCTGCTCCAAGGAGGTAACTACGATGCCAGCGAGCGTT
TCATCGAACCCACCATCTTGGTGGACGTGAAAGCTTTCTAGACCAT
BS22050.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:20:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Aldh-III-RO | 1692 | CG11140-PO | 1..962 | 17..978 | 4810 | 100 | Plus |
Aldh-III-RN | 1692 | CG11140-PN | 1..962 | 17..978 | 4810 | 100 | Plus |
Aldh-III-RQ | 1695 | CG11140-PQ | 1..965 | 17..978 | 4745 | 99.7 | Plus |
Aldh-III-RO | 1692 | CG11140-PO | 1111..1169 | 973..1031 | 295 | 100 | Plus |
Aldh-III-RN | 1692 | CG11140-PN | 1111..1169 | 973..1031 | 295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:20:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Aldh-III-RO | 2448 | CG11140-RO | 340..1301 | 17..978 | 4810 | 100 | Plus |
Aldh-III-RN | 2352 | CG11140-RN | 244..1205 | 17..978 | 4810 | 100 | Plus |
Aldh-III-RQ | 2923 | CG11140-RQ | 982..1946 | 17..978 | 4745 | 99.7 | Plus |
Aldh-III-RO | 2448 | CG11140-RO | 1450..1508 | 973..1031 | 295 | 100 | Plus |
Aldh-III-RN | 2352 | CG11140-RN | 1354..1412 | 973..1031 | 295 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:19:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 7470393..7470617 | 692..468 | 1125 | 100 | Minus |
2R | 25286936 | 2R | 7470702..7470883 | 469..288 | 910 | 100 | Minus |
2R | 25286936 | 2R | 7469909..7470072 | 855..692 | 820 | 100 | Minus |
2R | 25286936 | 2R | 7469723..7469847 | 978..854 | 625 | 100 | Minus |
2R | 25286936 | 2R | 7473722..7473844 | 229..107 | 615 | 100 | Minus |
2R | 25286936 | 2R | 7469459..7469517 | 1031..973 | 295 | 100 | Minus |
2R | 25286936 | 2R | 7473288..7473346 | 288..230 | 295 | 100 | Minus |
2R | 25286936 | 2R | 7475440..7475494 | 71..17 | 275 | 100 | Minus |
2R | 25286936 | 2R | 7475342..7475378 | 107..71 | 185 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:19:59 has no hits.
BS22050.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:20 Download gff for
BS22050.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aldh-III-RJ | 988..1994 | 23..1029 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:31 Download gff for
BS22050.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aldh-III-RN | 250..1203 | 23..976 | 100 | -> | Plus |
Aldh-III-RN | 1358..1410 | 977..1029 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:09 Download gff for
BS22050.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aldh-III-RN | 250..1203 | 23..976 | 100 | -> | Plus |
Aldh-III-RN | 1358..1410 | 977..1029 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:09 Download gff for
BS22050.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 7469461..7469513 | 977..1029 | 100 | <- | Minus |
2R | 7469725..7469845 | 856..976 | 100 | <- | Minus |
2R | 7469909..7470072 | 692..855 | 100 | <- | Minus |
2R | 7470394..7470615 | 470..691 | 100 | <- | Minus |
2R | 7470702..7470882 | 289..469 | 100 | <- | Minus |
2R | 7473288..7473346 | 230..288 | 100 | <- | Minus |
2R | 7473722..7473843 | 108..229 | 100 | <- | Minus |
2R | 7475342..7475377 | 72..107 | 100 | <- | Minus |
2R | 7475440..7475488 | 23..71 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:31 Download gff for
BS22050.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 3357899..3358120 | 470..691 | 100 | <- | Minus |
arm_2R | 3356966..3357018 | 977..1029 | 100 | <- | Minus |
arm_2R | 3357230..3357350 | 856..976 | 100 | <- | Minus |
arm_2R | 3357414..3357577 | 692..855 | 100 | <- | Minus |
arm_2R | 3358207..3358387 | 289..469 | 100 | <- | Minus |
arm_2R | 3360793..3360851 | 230..288 | 100 | <- | Minus |
arm_2R | 3361227..3361348 | 108..229 | 100 | <- | Minus |
arm_2R | 3362847..3362882 | 72..107 | 100 | <- | Minus |
arm_2R | 3362945..3362993 | 23..71 | 100 | | Minus |
BS22050.pep Sequence
Translation from 16 to 1029
> BS22050.pep
MFDNAIKPHPEANGAPINAGDRPITTVINIEPEPETESPIGIFTSQPESQ
QQQPEQLQSESESDRMANFDDTLQRARLAFSSGKTRNVSFRRKQLENLLR
CYEEHENEIISALEADLRRPKQESLIVETEFMKNDIRHILFQLDEWVQSE
KPPKSFVNMMDDVQIYNDPFGVVLVIGAWNYPLQLLLVPVASAIAAGNCV
VIKPSEIAANCAKFIADVIPKYLDNDCYPVVCGGPSETAELLNQRFDYIF
YTGSTRVGKIIHAAANKYLTPTTLELGGKSPCYIDKSVDMRTAVKRILWG
KLINCGQTCIAPDYILCSKEVTTMPASVSSNPPSWWT*
BS22050.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Aldh-III-PO | 563 | CG11140-PO | 1..321 | 1..321 | 1682 | 100 | Plus |
Aldh-III-PN | 563 | CG11140-PN | 1..321 | 1..321 | 1682 | 100 | Plus |
Aldh-III-PP | 563 | CG11140-PP | 1..322 | 1..321 | 1670 | 99.7 | Plus |
Aldh-III-PQ | 564 | CG11140-PQ | 1..322 | 1..321 | 1670 | 99.7 | Plus |
Aldh-III-PR | 497 | CG11140-PR | 1..256 | 66..321 | 1343 | 100 | Plus |