BS22057.complete Sequence
395 bp assembled on 2011-01-31
GenBank Submission: KX804361
> BS22057.complete
GAAGTTATCAGTCGACATGGATATTTTTTCCAATTGTCCGGGCTTTTGCC
CCTCCTGCGGCTCCATTCTGCCCGAGCTTCAAGTCAAGGGCAATGTGATT
TGCTACAACTGCAAGAAGGAGTTTCAGCCAGATGTTTACAGCGGCGAGAA
GTCCGAGTTTACCATACACTTCAACACCTACGATCCCAGCAAGGTGTTCA
ACAGGACGAAAAGGGAGTCGGAATCGGACGCGGATGGCCCCGTTGTGGAG
AGGAAGTGTCCCAAGTGCAACCACGACAAGATGTCCTATGCCACCCTGCA
GCTTCGATCGGCGGACGAAGGCCAGACGGTGTTCTTTACCTGCCTTAAGT
GCAAATTCAAAGAATCCGAAAACTCTTAGAAGCTTTCTAGACCAT
BS22057.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:46:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpI12-RA | 363 | CG13418-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:46:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpI12-RA | 530 | CG13418-RA | 81..444 | 16..379 | 1820 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:46:18
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 21777378..21777598 | 354..134 | 1105 | 100 | Minus |
3R | 32079331 | 3R | 21777649..21777767 | 134..16 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-27 00:46:19 has no hits.
BS22057.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:31:54 Download gff for
BS22057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpI12-RA | 23..385 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:33:31 Download gff for
BS22057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpI12-RA | 82..444 | 17..379 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:09:08 Download gff for
BS22057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpI12-RA | 82..444 | 17..379 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:09:08 Download gff for
BS22057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 21777289..21777313 | 355..379 | 100 | <- | Minus |
3R | 21777378..21777597 | 135..354 | 100 | <- | Minus |
3R | 21777649..21777766 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:33:31 Download gff for
BS22057.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 17603100..17603319 | 135..354 | 100 | <- | Minus |
arm_3R | 17603371..17603488 | 17..134 | 100 | | Minus |
arm_3R | 17603011..17603035 | 355..379 | 100 | <- | Minus |
BS22057.pep Sequence
Translation from 16 to 378
> BS22057.pep
MDIFSNCPGFCPSCGSILPELQVKGNVICYNCKKEFQPDVYSGEKSEFTI
HFNTYDPSKVFNRTKRESESDADGPVVERKCPKCNHDKMSYATLQLRSAD
EGQTVFFTCLKCKFKESENS*
BS22057.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:00
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpI12-PA | 120 | CG13418-PA | 1..120 | 1..120 | 662 | 100 | Plus |