BS22066.complete Sequence
302 bp assembled on 2011-01-25
GenBank Submission: KX805564
> BS22066.complete
GAAGTTATCAGTCGACATGATGAACCTGTCGAGAGCTGTTGTCCGTAGCT
TCGCTACCACCGCTGGCCGCCGGTCCGCCGCCGTGCCCAAGGACCAGATC
GAGAAGGGATACTTCGAGATCCGCAAGGTGCAGGAGCACTTTCAGAAGAA
GGACGGCAAGCCCGTCTTCCTCAAGGGATCCGTCGTGGACAACGTGCTCT
ACCGCGTCACCGTCGCTCTCGCCCTCGTCGGCATCGGTGGCATGGGCAAG
CTTTTCTACGAGCTGAGTGTTCCCAAGAAGGAGTGAAAGCTTTCTAGACC
AT
BS22066.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:21:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9603-RA | 270 | CG9603-PA | 1..270 | 17..286 | 1350 | 100 | Plus |
CG9603-RB | 297 | CG9603-PB | 46..297 | 35..286 | 1260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:21:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9603-RA | 621 | CG9603-RA | 114..384 | 17..287 | 1355 | 100 | Plus |
CG9603-RB | 566 | CG9603-RB | 77..329 | 35..287 | 1265 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:21:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8340519..8340771 | 287..35 | 1265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:21:45 has no hits.
BS22066.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:22 Download gff for
BS22066.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9603-RA | 112..380 | 17..285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:54 Download gff for
BS22066.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9603-RA | 114..382 | 17..285 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:43 Download gff for
BS22066.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9603-RA | 114..382 | 17..285 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:43 Download gff for
BS22066.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8340521..8340771 | 35..285 | 100 | <- | Minus |
3R | 8340913..8340930 | 17..34 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:54 Download gff for
BS22066.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4166243..4166493 | 35..285 | 100 | <- | Minus |
arm_3R | 4166635..4166652 | 17..34 | 100 | | Minus |
BS22066.pep Sequence
Translation from 16 to 285
> BS22066.pep
MMNLSRAVVRSFATTAGRRSAAVPKDQIEKGYFEIRKVQEHFQKKDGKPV
FLKGSVVDNVLYRVTVALALVGIGGMGKLFYELSVPKKE*
BS22066.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:53
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9603-PA | 89 | CG9603-PA | 1..89 | 1..89 | 444 | 100 | Plus |
CG9603-PB | 98 | CG9603-PB | 16..98 | 7..89 | 415 | 100 | Plus |