BS22072.complete Sequence
718 bp assembled on 2011-01-25
GenBank Submission: KX800987
> BS22072.complete
GAAGTTATCAGTCGACATGGAATCGCCCAGTGCCCGAACTCTCGGGAATT
CCCTGGGCGATGACAGCGGCAACGGGAATGAAAACGGGAATGGAAGTGGA
AACGGAAACACCACAATGATGCCGCATGGAATCTACCATGAGCGGCAGAC
ACGTCACCTGTGCGGCCTCCACGCACTGAACAATCTGTTCCAGGGGCCCG
ACATGTTCTCCAAATCGGAACTGGACGACTACTGCACCACATTGACCCCG
CGCAACTGGCTGAATCCGCATCGATCGTGGATCGGTTGGGGCAACTACGA
CGTCAATGTGATCATGTACGCCCTGCAGCAGCGGAATTGCGAGGCGGTGT
GGTTTGATCGACGGCGGGATCCACACTGTCTCAATCTGAGCGTCATTTTC
GGCTTCATTCTCAATGTACCGGCTCAGATGAGCCTGGGCTACTACATCCC
ACTGCCCTTCCACATGCGACACTGGCTGGCACTGCGTCGCTTGAACGGCA
GCTACTACAATCTGGACTCCAAGCTGCGCGAGCCCAAGTGCCTGGGCACC
GAGCAGCAGTTCCTCGAGTTTCTGGCCACCCAACTGCAGATGGATCACGA
GCTATTCCTCGTGTTGGACGAGGAGACGGACTGCAAGGATAAGAGCCAGC
AACGTTGGCTGCTACCGCAGTTCAGGGATTAAAAGCTTTCTAGACCATTC
GTTTGGCGCGCGAAAGGG
BS22072.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:21:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-RA | 666 | CG3781-PA | 1..666 | 17..682 | 3330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:21:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-RA | 951 | CG3781-RA | 97..766 | 13..682 | 3335 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:21:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6261265..6261934 | 13..682 | 3335 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:21:10 has no hits.
BS22072.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:21 Download gff for
BS22072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 101..770 | 17..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:44 Download gff for
BS22072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 101..770 | 17..688 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:32 Download gff for
BS22072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG3781-RA | 101..770 | 17..688 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:32 Download gff for
BS22072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6261269..6261938 | 17..688 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:44 Download gff for
BS22072.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6155302..6155971 | 17..688 | 99 | | Plus |
BS22072.pep Sequence
Translation from 16 to 681
> BS22072.pep
MESPSARTLGNSLGDDSGNGNENGNGSGNGNTTMMPHGIYHERQTRHLCG
LHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIM
YALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHM
RHWLALRRLNGSYYNLDSKLREPKCLGTEQQFLEFLATQLQMDHELFLVL
DEETDCKDKSQQRWLLPQFRD*
BS22072.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG3781-PA | 221 | CG3781-PA | 1..221 | 1..221 | 1228 | 100 | Plus |