Clone BS22072 Report

Search the DGRC for BS22072

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:220
Well:72
Vector:pDNR-Dual
Associated Gene/TranscriptCG3781-RA
Protein status:BS22072.pep: full length peptide match
Sequenced Size:718

Clone Sequence Records

BS22072.complete Sequence

718 bp assembled on 2011-01-25

GenBank Submission: KX800987

> BS22072.complete
GAAGTTATCAGTCGACATGGAATCGCCCAGTGCCCGAACTCTCGGGAATT
CCCTGGGCGATGACAGCGGCAACGGGAATGAAAACGGGAATGGAAGTGGA
AACGGAAACACCACAATGATGCCGCATGGAATCTACCATGAGCGGCAGAC
ACGTCACCTGTGCGGCCTCCACGCACTGAACAATCTGTTCCAGGGGCCCG
ACATGTTCTCCAAATCGGAACTGGACGACTACTGCACCACATTGACCCCG
CGCAACTGGCTGAATCCGCATCGATCGTGGATCGGTTGGGGCAACTACGA
CGTCAATGTGATCATGTACGCCCTGCAGCAGCGGAATTGCGAGGCGGTGT
GGTTTGATCGACGGCGGGATCCACACTGTCTCAATCTGAGCGTCATTTTC
GGCTTCATTCTCAATGTACCGGCTCAGATGAGCCTGGGCTACTACATCCC
ACTGCCCTTCCACATGCGACACTGGCTGGCACTGCGTCGCTTGAACGGCA
GCTACTACAATCTGGACTCCAAGCTGCGCGAGCCCAAGTGCCTGGGCACC
GAGCAGCAGTTCCTCGAGTTTCTGGCCACCCAACTGCAGATGGATCACGA
GCTATTCCTCGTGTTGGACGAGGAGACGGACTGCAAGGATAAGAGCCAGC
AACGTTGGCTGCTACCGCAGTTCAGGGATTAAAAGCTTTCTAGACCATTC
GTTTGGCGCGCGAAAGGG

BS22072.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:21:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-RA 666 CG3781-PA 1..666 17..682 3330 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:21:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-RA 951 CG3781-RA 97..766 13..682 3335 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:21:08
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6261265..6261934 13..682 3335 99.9 Plus
Blast to na_te.dros performed on 2014-11-26 15:21:10 has no hits.

BS22072.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:21 Download gff for BS22072.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 101..770 17..688 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:51:44 Download gff for BS22072.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 101..770 17..688 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:11:32 Download gff for BS22072.complete
Subject Subject Range Query Range Percent Splice Strand
CG3781-RA 101..770 17..688 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:11:32 Download gff for BS22072.complete
Subject Subject Range Query Range Percent Splice Strand
X 6261269..6261938 17..688 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:51:44 Download gff for BS22072.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6155302..6155971 17..688 99   Plus

BS22072.pep Sequence

Translation from 16 to 681

> BS22072.pep
MESPSARTLGNSLGDDSGNGNENGNGSGNGNTTMMPHGIYHERQTRHLCG
LHALNNLFQGPDMFSKSELDDYCTTLTPRNWLNPHRSWIGWGNYDVNVIM
YALQQRNCEAVWFDRRRDPHCLNLSVIFGFILNVPAQMSLGYYIPLPFHM
RHWLALRRLNGSYYNLDSKLREPKCLGTEQQFLEFLATQLQMDHELFLVL
DEETDCKDKSQQRWLLPQFRD*

BS22072.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
CG3781-PA 221 CG3781-PA 1..221 1..221 1228 100 Plus