BS22077.complete Sequence
737 bp assembled on 2011-01-25
GenBank Submission: KX802780
> BS22077.complete
GAAGTTATCAGTCGACATGTACGCATCTAACCTCTTATACCTGTTGGCAT
TATGGAACCTTTGGGATCTCAGTGGTGGGCAGCAGGACATTCCGAACGGA
AAGGCTACATTGCCAAGTCCACAAACGCCGCAAAATACAATCGATCAGAT
TGGTATTAACCAGAATTATTGGTTTACATACAACGCGCTTAAACAAAACG
AAACATTGGCAATTATTGATACAATGGAAATGCGCATAGCAAGTAGCTTG
CTGGAGTTTAAGGCCCAGATGGAAATCCAGCTTCAGCCGTTAAAGATTAT
AATGCGACACCATGCATCCAACATCAAAGCGTCTAACAACATCAAGATGA
GACGATTCGAGAAAGTTGGCTCCAGACATTTTCACATCGAGAAGAATCTA
ATGCAAACTTGGTTTGAGGCATATGTCACATGTCGTAAAATGAACGGTCA
TCTGGCGAACATCCAGGATGAGATGGAGCTGGATGGCATCTTGGCGTTAG
CACCCAACAATAGCTACTGGATAGATATATCCAAACTGGTTGAAAATGGC
GGCACATTCGTCTCCACCCTAACCGGACGAGAACCCTTCTTTGTCAAATG
GAAGAGTAATCAGGATACAAAAAAAAAGAATCAATGCGTTTACATCTATG
CTAAAGAGATGTCCTATGATGAGTGTTTTGAAAAAAAATCTTTCGTTTGC
CAAGCAGACCAGTGGGCCTAAAAGCTTTCTAGACCAT
BS22077.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:26:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp29AB-RA | 705 | CG17797-PA | 1..705 | 17..721 | 3525 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:26:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp29AB-RA | 767 | CG17797-RA | 9..717 | 14..722 | 3545 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:26:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8392506..8393214 | 722..14 | 3545 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:26:21 has no hits.
BS22077.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:25 Download gff for
BS22077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp29AB-RA | 29..731 | 17..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:52:55 Download gff for
BS22077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp29AB-RA | 12..714 | 17..719 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:06 Download gff for
BS22077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Acp29AB-RA | 12..714 | 17..719 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:06 Download gff for
BS22077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8392509..8393211 | 17..719 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:52:55 Download gff for
BS22077.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8392509..8393211 | 17..719 | 100 | | Minus |
BS22077.pep Sequence
Translation from 16 to 720
> BS22077.pep
MYASNLLYLLALWNLWDLSGGQQDIPNGKATLPSPQTPQNTIDQIGINQN
YWFTYNALKQNETLAIIDTMEMRIASSLLEFKAQMEIQLQPLKIIMRHHA
SNIKASNNIKMRRFEKVGSRHFHIEKNLMQTWFEAYVTCRKMNGHLANIQ
DEMELDGILALAPNNSYWIDISKLVENGGTFVSTLTGREPFFVKWKSNQD
TKKKNQCVYIYAKEMSYDECFEKKSFVCQADQWA*
BS22077.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:10:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Acp29AB-PA | 234 | CG17797-PA | 1..234 | 1..234 | 1248 | 100 | Plus |
| lectin-29Ca-PA | 236 | CG17799-PA | 4..236 | 2..234 | 557 | 45.1 | Plus |
| lectin-30A-PA | 223 | CG17011-PA | 29..222 | 42..233 | 386 | 39.8 | Plus |
| CG2839-PA | 826 | CG2839-PA | 53..266 | 42..232 | 270 | 30.7 | Plus |
| lectin-21Cb-PB | 249 | CG13686-PB | 68..248 | 45..230 | 246 | 31.4 | Plus |
