BS22078.complete Sequence
743 bp assembled on 2011-01-25
GenBank Submission: KX804671
> BS22078.complete
GAAGTTATCAGTCGACATGTACAAGTACGCAACTTGCATTTTCTCCATTT
TCGCTTTATGGAACTTTTGGGGCGTCAGTGCCAAAAAGCAGGATACTTCC
ACAGGAACAAATGAATTGCCAAAAGCACCAATGCCGTATTATACAATCGA
GAATATTGATATGCACCAGCAGCACTGGTTTACCTACAATTCGCTAAGAC
AAAATGGAACTTTGTGGAGAATTGGTAATATGGAGCAACGCTTAGAAATG
CGATTGCAGTCCTTTCAAAACCAGATGGAAACTAAACTTCGGGCTCTAAA
GCAACAAATTGAACCCTACATGGAAAACGTTAAAATGTCCAACAAAATCA
AAATGTCCGTATTCAAGAAGATTGGCTCCCGGCACTTTTACTTAGAAAAG
CAAAAGAAGATGCCCTGGGATAGCGCATACGACACGTGTCGTCAAATGGG
CGGTCACCTGGCGAATATCCTCGATGAGAAGGAGCTGAATGAAATATTCT
CAGAGGAAACCAAAAAAAAGTACTGGGTAGATATCAACAGCCGTGCCAAC
GATGGAGCGTCCTGGATTTCTACACTATCCGGAAGGGATGTACCATTTCT
GAAATGGAAGCCAAATCTGGCCACAAATATACATAACCATTGCGTGTATA
TCAATTCCAATGAAATGTACTTTGAAAATTGTGCCAATGATAACTATTTT
GCTTGCCAAGCCGAGCAATGGGCCTGAAAGCTTTCTAGACCAT
BS22078.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:27:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-29Ca-RA | 711 | CG17799-PA | 1..711 | 17..727 | 3555 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:27:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-29Ca-RA | 792 | CG17799-RA | 6..722 | 12..728 | 3570 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 8393559..8394275 | 728..12 | 3570 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:27:25 has no hits.
BS22078.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:25 Download gff for
BS22078.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-29Ca-RA | 11..720 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:07 Download gff for
BS22078.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-29Ca-RA | 11..720 | 17..726 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:27 Download gff for
BS22078.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| lectin-29Ca-RA | 11..720 | 17..726 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:27 Download gff for
BS22078.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 8393561..8394270 | 17..726 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:07 Download gff for
BS22078.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 8393561..8394270 | 17..726 | 100 | | Minus |
BS22078.pep Sequence
Translation from 16 to 726
> BS22078.pep
MYKYATCIFSIFALWNFWGVSAKKQDTSTGTNELPKAPMPYYTIENIDMH
QQHWFTYNSLRQNGTLWRIGNMEQRLEMRLQSFQNQMETKLRALKQQIEP
YMENVKMSNKIKMSVFKKIGSRHFYLEKQKKMPWDSAYDTCRQMGGHLAN
ILDEKELNEIFSEETKKKYWVDINSRANDGASWISTLSGRDVPFLKWKPN
LATNIHNHCVYINSNEMYFENCANDNYFACQAEQWA*
BS22078.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| lectin-29Ca-PA | 236 | CG17799-PA | 1..236 | 1..236 | 1296 | 100 | Plus |
| Acp29AB-PA | 234 | CG17797-PA | 2..234 | 4..236 | 557 | 45.1 | Plus |
| lectin-30A-PA | 223 | CG17011-PA | 1..222 | 1..235 | 396 | 35.4 | Plus |
| lectin-21Ca-PA | 269 | CG2826-PA | 1..265 | 1..231 | 256 | 27.9 | Plus |
| lectin-28C-PC | 265 | CG7106-PC | 101..263 | 76..234 | 231 | 34.1 | Plus |
