BS22103.complete Sequence
1298 bp assembled on 2011-01-27
GenBank Submission: KX806109
> BS22103.complete
GAAGTTATCAGTCGACATGAACAAGCGCAGCGTCATCATCGCGGGAATCG
TGGCCAGCCTGTTGGGCTTGGCGCTCGGTGCCAACTTCTACTTTATGTAC
TACCTCAGCGCCGAGGAGGGTCATCTGGCCAGCGTCCGGGCGCTGGAGAA
CATGATACGGCACAAGATGCGCCACCTAAAACCCAACTACCTCAATCGCA
ATCCCCGCTTCTTCATGTTCCGCAACAAGCTGCTTAAGAACTACAAGGCG
GCGCCGTACGAGAACGCCAGTGTCCTCTGGGACATTGCGAACTGGTGGCC
GCACGAAAACGAGGTCTATCCCTTATACGACTCATCGATGGGACAGCTTT
TAGAAACACTGCGCCGCGAACCTATCACCCGGGTGAGCAACCTGGGTCGG
GGCACGCAACTGAAGCTCCTCGTCCGCCTTTCCCACCAGCAGAAGGTGAT
CTTTAAGCCGCAATGGTATCCGCGGGAAGAGGTCATCGATGGCATGATAT
ACAGTGGCAAGGATCGCCACACGGCGGAAGTATATGCCTTCTATCTGGGC
GCCGTGCTCGACTTTCGATGGACGCCCATAGTGGTGGGTCGAGTGGTGAA
CCTGAAGAAGGAGATATATGCCAAAGGCGATCCGGAACTCCAGCAAACCA
TAAACATCGAAACGGACGAGGATGGCAGGGAGAAGTACTGCCTGTTCGGG
AAGTGTCACTACTGCAACGAGGAGGAGACTGTTTGTGGCGATGAGCGGCA
CAACATTGAAGGTGTGCTCATATATATTGTTCCGGGTACGTTGGCTAAGC
GGCGATCACCGTGGCAACGCACCTACAAGGATGACAAGCGGGCGCCCTGG
GAGGACGATATGACCTATTGCAAATCGTTGAAAAATAAAATGGAGACCAT
CCGCCTGCTGGACCTTATAGATGCGTCTATTTTCGACTACCTAATCCAAA
ATGGAGATCGGCATCACTACGAGACGCGGGAAGAGCGCGTGGTGCTTATA
GACAATGGAAAAGCCTTCGGAAACCCGAACAAGGATCACTTGGACATATT
GGCGCCACTCTACCAATGCTGCCTTCTGCGAAAGTCCACGTGGGATCGCC
TGCAAGTCTTTTCCGGCGGCGTACTCACGGAAATCATCGATCGACTATCC
AAGCAGGATGCTCTCTATCCCCTGATTACGGATAAGCATAAAAAAGGAGT
GGAGCGACGACTTCTGGTGGTCTATGCTGTTGTGGAGCACTGCATGGACA
TCGAGGGCGACAAAATGTTCAAAACTCTGTAGAAGCTTTCTAGACCAT
BS22103.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-RE | 1266 | CG3631-PE | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG3631-RD | 1266 | CG3631-PD | 1..1266 | 17..1282 | 6330 | 100 | Plus |
| CG3631-RC | 1266 | CG3631-PC | 1..1266 | 17..1282 | 6330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-RE | 2710 | CG3631-RE | 874..2139 | 17..1282 | 6330 | 100 | Plus |
| CG3631-RD | 2705 | CG3631-RD | 869..2134 | 17..1282 | 6330 | 100 | Plus |
| CG3631-RC | 2776 | CG3631-RC | 940..2205 | 17..1282 | 6330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14880957..14881535 | 295..873 | 2895 | 100 | Plus |
| 3R | 32079331 | 3R | 14880516..14880794 | 17..295 | 1395 | 100 | Plus |
| 3R | 32079331 | 3R | 14881853..14882060 | 1075..1282 | 1040 | 100 | Plus |
| 3R | 32079331 | 3R | 14881596..14881796 | 874..1074 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:56:39 has no hits.
BS22103.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:18 Download gff for
BS22103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RD | 885..2150 | 17..1282 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:15 Download gff for
BS22103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RC | 926..2191 | 17..1282 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:23 Download gff for
BS22103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3631-RC | 940..2205 | 17..1282 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:23 Download gff for
BS22103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14880516..14880794 | 17..295 | 100 | -> | Plus |
| 3R | 14880958..14881535 | 296..873 | 100 | -> | Plus |
| 3R | 14881596..14881796 | 874..1074 | 100 | -> | Plus |
| 3R | 14881853..14882060 | 1075..1282 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:15 Download gff for
BS22103.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 10706238..10706516 | 17..295 | 100 | -> | Plus |
| arm_3R | 10706680..10707257 | 296..873 | 100 | -> | Plus |
| arm_3R | 10707318..10707518 | 874..1074 | 100 | -> | Plus |
| arm_3R | 10707575..10707782 | 1075..1282 | 100 | | Plus |
BS22103.pep Sequence
Translation from 16 to 1281
> BS22103.pep
MNKRSVIIAGIVASLLGLALGANFYFMYYLSAEEGHLASVRALENMIRHK
MRHLKPNYLNRNPRFFMFRNKLLKNYKAAPYENASVLWDIANWWPHENEV
YPLYDSSMGQLLETLRREPITRVSNLGRGTQLKLLVRLSHQQKVIFKPQW
YPREEVIDGMIYSGKDRHTAEVYAFYLGAVLDFRWTPIVVGRVVNLKKEI
YAKGDPELQQTINIETDEDGREKYCLFGKCHYCNEEETVCGDERHNIEGV
LIYIVPGTLAKRRSPWQRTYKDDKRAPWEDDMTYCKSLKNKMETIRLLDL
IDASIFDYLIQNGDRHHYETREERVVLIDNGKAFGNPNKDHLDILAPLYQ
CCLLRKSTWDRLQVFSGGVLTEIIDRLSKQDALYPLITDKHKKGVERRLL
VVYAVVEHCMDIEGDKMFKTL*
BS22103.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3631-PE | 421 | CG3631-PE | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG3631-PD | 421 | CG3631-PD | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG3631-PC | 421 | CG3631-PC | 1..421 | 1..421 | 2248 | 100 | Plus |
| CG31145-PF | 528 | CG31145-PF | 186..523 | 97..416 | 463 | 32.4 | Plus |
| CG31145-PB | 528 | CG31145-PB | 186..523 | 97..416 | 463 | 32.4 | Plus |
