BS22134.complete Sequence
365 bp assembled on 2011-01-27
GenBank Submission: KX804286
> BS22134.complete
GAAGTTATCAGTCGACATGGGACGCATTTTCTTGGAACATCTTGGGGGTC
TGAAACTCTTCAATTGCGCCCAATGCCACACGAACCTGACCAACCGCAGT
CAATTGATCAGTACCCGATTCACAGGCGCAACAGGACGCGCCTATCTGTT
TAAGCGTGTGGTCAACCTGACCTTCAGCAACATCCAGGAACGGGTCATGC
TCACGGGTCGCCACATGGTGCGCGACGTTATGTGCAAGAATTGTGGAGCC
AAACTTGGCTGGATGTACGAGTTCGCCACCGAAGAGTCACAAAAGTGGGT
AAACGCGGATAGGCAGCTTGTCACTAGGGATTCTGGGTTATACAAGTAGA
AGCTTTCTAGACCAT
BS22134.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-RB | 333 | CG1989-PB | 1..333 | 17..349 | 1665 | 100 | Plus |
Yippee-RA | 366 | CG1989-PA | 1..278 | 17..294 | 1390 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-RB | 1293 | CG1989-RB | 341..673 | 17..349 | 1665 | 100 | Plus |
Yippee-RA | 1136 | CG1989-RA | 341..618 | 17..294 | 1390 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:56:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 13386534..13386752 | 349..131 | 1095 | 100 | Minus |
X | 23542271 | X | 13386814..13386932 | 135..17 | 595 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:56:48 has no hits.
BS22134.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:18 Download gff for
BS22134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 318..650 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:19 Download gff for
BS22134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 318..650 | 17..349 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:29 Download gff for
BS22134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Yippee-RB | 341..673 | 17..349 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:29 Download gff for
BS22134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 13386534..13386748 | 135..349 | 100 | <- | Minus |
X | 13386815..13386932 | 17..134 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:19 Download gff for
BS22134.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 13280567..13280781 | 135..349 | 100 | <- | Minus |
arm_X | 13280848..13280965 | 17..134 | 100 | | Minus |
BS22134.pep Sequence
Translation from 16 to 348
> BS22134.pep
MGRIFLEHLGGLKLFNCAQCHTNLTNRSQLISTRFTGATGRAYLFKRVVN
LTFSNIQERVMLTGRHMVRDVMCKNCGAKLGWMYEFATEESQKWVNADRQ
LVTRDSGLYK*
BS22134.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Yippee-PB | 110 | CG1989-PB | 1..110 | 1..110 | 585 | 100 | Plus |
Yippee-PA | 121 | CG1989-PA | 1..94 | 1..94 | 496 | 98.9 | Plus |
CG15309-PE | 114 | CG15309-PE | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PD | 114 | CG15309-PD | 14..95 | 13..94 | 204 | 45.1 | Plus |
CG15309-PC | 114 | CG15309-PC | 14..95 | 13..94 | 204 | 45.1 | Plus |