BS22149.complete Sequence
803 bp assembled on 2011-01-27
GenBank Submission: KX803571
> BS22149.complete
GAAGTTATCAGTCGACATGTCTGATTCTGCAGTTGCAACGTCCGCTTCCC
CAGTGGCTGCCCCACCAGCGACAGTTGAGAAGAAAGTGGTCCAAAAAAAG
GCATCTGGATCTGCTGGCACAAAGGCAAAGAAAGCCTCTGCGACGCCGTC
ACATCCGCCAACTCAGCAAATGGTGGACGCTTCCATTAAAAATTTAAAGG
AACGTGGCGGTTCATCACTTCTGGCAATCAAAAAATATATCACTGCCACT
TATAAATGCGACGCCCAAAAGTTAGCGCCATTCATCAAGAAGTACTTAAA
ATCGGCCGTGGTCAATGGAAAGCTTATTCAAACTAAGGGAAAGGGTGCAT
CTGGATCTTTCAAACTGTCGGCCTCTGCCAAGAAGGAAAAGGATCCGAAG
GCAAAGTCGAAGGTTTTGTCTGCTGAGAAAAAAGTTCAAAGCAAGAAGGT
AGCCTCTAAGAAGATTGGTGTCTCCTCCAAAAAAACTGCCGTTGGGGCTG
CTGACAAAAAGCCCAAAGCTAAGAAGGCTGTGGCTACCAAAAAGACTGCC
GAAAATAAGAAAACTGAGAAGGCAAAAGCCAAGGATGCCAAGAAAACTGG
AATCATAAAGTCGAAGCCCGCCGCAACAAAGGCGAAAGTGACTGCAGCGA
AGCCAAAGGCTGTAATAGCGAAAGCGTCAAAGGCAAAGCCAGCGGTGTCT
GCAAAACCCAAAAAGACGGTGAAGAAAGCATCGGTTTCTGCTACCGCCAA
GAAGCCGAAAGCGAAGACTACGGCTGCCAAAAAGTAAAAGCTTTCTAGAC
CAT
BS22149.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:58:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His1:CG33864-RA | 771 | CG33864-PA | 1..771 | 17..787 | 3840 | 99.9 | Plus |
| His1:CG33852-RA | 771 | CG33852-PA | 1..771 | 17..787 | 3840 | 99.9 | Plus |
| His1:CG33849-RA | 771 | CG33849-PA | 1..771 | 17..787 | 3840 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:58:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His1:CG33864-RA | 1023 | CG33864-RA | 160..931 | 17..788 | 3845 | 99.9 | Plus |
| His1:CG33852-RA | 1023 | CG33852-RA | 160..931 | 17..788 | 3845 | 99.9 | Plus |
| His1:CG33849-RA | 1023 | CG33849-RA | 160..931 | 17..788 | 3845 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 21427075..21427846 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21491700..21492471 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21496745..21497516 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21501792..21502563 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21506843..21507614 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21511887..21512658 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21516932..21517703 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21536505..21537276 | 17..788 | 3845 | 99.9 | Plus |
| 2L | 23513712 | 2L | 21417112..21417883 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21432122..21432893 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21437170..21437941 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21456272..21457043 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21461332..21462103 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21466375..21467146 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21471418..21472189 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21476461..21477232 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21481504..21482275 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21521775..21522546 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21526618..21527389 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21531461..21532232 | 17..788 | 3830 | 99.7 | Plus |
| 2L | 23513712 | 2L | 21422014..21422785 | 17..788 | 3815 | 99.6 | Plus |
| 2L | 23513712 | 2L | 21451211..21451982 | 17..788 | 3815 | 99.6 | Plus |
| 2L | 23513712 | 2L | 21486655..21487426 | 17..788 | 3815 | 99.6 | Plus |
| 2L | 23513712 | 2L | 21543023..21543688 | 17..682 | 3255 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:58:25 has no hits.
BS22149.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:21 Download gff for
BS22149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His1:CG33837-RA | 35..796 | 17..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:04 Download gff for
BS22149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His1:CG33846-RA | 160..921 | 17..778 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:14 Download gff for
BS22149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| His1:CG33849-RA | 160..921 | 17..778 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:14 Download gff for
BS22149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 21427075..21427836 | 17..778 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:04 Download gff for
BS22149.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 21427075..21427836 | 17..778 | 99 | | Plus |
BS22149.pep Sequence
Translation from 16 to 786
> BS22149.pep
MSDSAVATSASPVAAPPATVEKKVVQKKASGSAGTKAKKASATPSHPPTQ
QMVDASIKNLKERGGSSLLAIKKYITATYKCDAQKLAPFIKKYLKSAVVN
GKLIQTKGKGASGSFKLSASAKKEKDPKAKSKVLSAEKKVQSKKVASKKI
GVSSKKTAVGAADKKPKAKKAVATKKTAENKKTEKAKAKDAKKTGIIKSK
PAATKAKVTAAKPKAVIAKASKAKPAVSAKPKKTVKKASVSATAKKPKAK
TTAAKK*
BS22149.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| His1:CG33861-PA | 256 | CG33861-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
| His1:CG33858-PA | 256 | CG33858-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
| His1:CG33855-PA | 256 | CG33855-PA | 1..256 | 1..256 | 1230 | 100 | Plus |
| His1:CG33864-PA | 256 | CG33864-PA | 1..256 | 1..256 | 1229 | 99.6 | Plus |
| His1:CG33852-PA | 256 | CG33852-PA | 1..256 | 1..256 | 1229 | 99.6 | Plus |
