BS22170.complete Sequence
824 bp assembled on 2011-01-27
GenBank Submission: KX806223
> BS22170.complete
GAAGTTATCAGTCGACATGGCAGGCAACGCCAACAGTGACGACGAATTCC
ATGATGCGATCGGGGAGGAGATAACCGAAAAAGAGGCCACCAGCACGCGG
CAGAGCGAAAAGGACGTGGATGAGATCGTGGAGAAGCAAAACCAGCTGGC
GTTGGATGACGAAGCGGAACAGGGCGCGGCTGGTGGAGATTCCATCGCGA
CACCAACGACAGTGGACTCTGAGCTAACCATTGAGGAGTTGCGCGAACGG
GAGAAGGATCTCAGCCCAGAGCAGCTGACAGCTAACAAAGAAAAGGCCGA
TAAGCTGAAAGTTGAGGGCAACGAGTTGTTCAAAAATGACGACGCCGAAG
GCGCCGCCAAGACCTACACAGAAGCCTTAGACATTTGCCCCTCGGCCAGC
TCCAAGGAGCGAGCAGTTCTCTACGGAAACAGGGCTGCTGCCAAGATTAA
GCTGGAGGCCAACAAAGCGGCCATCGACGACTGCACAAAGGCTATAGAAC
TGTGGCCGGAGTATGTGAGGGTGCTTTTAAGGCGCGCCAAGCTCTATGAG
CAAGAAGACAAGCCCGACGAGGCTCTGGAGGACTACAAAAAAGTTACTGA
GATCGATCCCGGTCAGCAGGAGGCTCGCGAGGCTCAGATTCGGCTGCCGC
CAATTATAAACGAGCGCAACGAGAAGCTCAAAAACGAGATGATGTCCAGC
TTAAAGGACCTGGGCAACATGATACTCAAACCGTTCGGACTGTCTACACA
GAATTTCCAAATGCAACAGGATCCCAACACGGGCTCGTATTCCATCAACT
TTAAATAAAAGCTTTCTAGACCAT
BS22170.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14894-RB | 792 | CG14894-PB | 1..792 | 17..808 | 3960 | 100 | Plus |
CG14894-RA | 792 | CG14894-PA | 1..792 | 17..808 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14894-RB | 1111 | CG14894-RB | 91..884 | 17..810 | 3970 | 100 | Plus |
CG14894-RA | 948 | CG14894-RA | 91..884 | 17..810 | 3970 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 16442402..16442917 | 532..17 | 2580 | 100 | Minus |
3R | 32079331 | 3R | 16442070..16442350 | 810..530 | 1405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:59:26 has no hits.
BS22170.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:23 Download gff for
BS22170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14894-RA | 91..880 | 17..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:29 Download gff for
BS22170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14894-RA | 91..880 | 17..806 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:38 Download gff for
BS22170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14894-RA | 91..880 | 17..806 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:38 Download gff for
BS22170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 16442074..16442348 | 532..806 | 100 | <- | Minus |
3R | 16442403..16442917 | 17..531 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:29 Download gff for
BS22170.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 12267796..12268070 | 532..806 | 100 | <- | Minus |
arm_3R | 12268125..12268639 | 17..531 | 100 | | Minus |
BS22170.pep Sequence
Translation from 16 to 807
> BS22170.pep
MAGNANSDDEFHDAIGEEITEKEATSTRQSEKDVDEIVEKQNQLALDDEA
EQGAAGGDSIATPTTVDSELTIEELREREKDLSPEQLTANKEKADKLKVE
GNELFKNDDAEGAAKTYTEALDICPSASSKERAVLYGNRAAAKIKLEANK
AAIDDCTKAIELWPEYVRVLLRRAKLYEQEDKPDEALEDYKKVTEIDPGQ
QEAREAQIRLPPIINERNEKLKNEMMSSLKDLGNMILKPFGLSTQNFQMQ
QDPNTGSYSINFK*
BS22170.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG14894-PB | 263 | CG14894-PB | 1..263 | 1..263 | 1331 | 100 | Plus |
CG14894-PA | 263 | CG14894-PA | 1..263 | 1..263 | 1331 | 100 | Plus |
Hop-PA | 490 | CG2720-PA | 289..463 | 75..254 | 187 | 34.7 | Plus |
unc-45-PA | 947 | CG2708-PA | 4..137 | 88..220 | 186 | 35.3 | Plus |
Tom70-PC | 589 | CG6756-PC | 61..185 | 65..189 | 173 | 29.6 | Plus |