Clone BS22170 Report

Search the DGRC for BS22170

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:221
Well:70
Vector:pDNR-Dual
Associated Gene/TranscriptCG14894-RA
Protein status:BS22170.pep: full length peptide match
Sequenced Size:824

Clone Sequence Records

BS22170.complete Sequence

824 bp assembled on 2011-01-27

GenBank Submission: KX806223

> BS22170.complete
GAAGTTATCAGTCGACATGGCAGGCAACGCCAACAGTGACGACGAATTCC
ATGATGCGATCGGGGAGGAGATAACCGAAAAAGAGGCCACCAGCACGCGG
CAGAGCGAAAAGGACGTGGATGAGATCGTGGAGAAGCAAAACCAGCTGGC
GTTGGATGACGAAGCGGAACAGGGCGCGGCTGGTGGAGATTCCATCGCGA
CACCAACGACAGTGGACTCTGAGCTAACCATTGAGGAGTTGCGCGAACGG
GAGAAGGATCTCAGCCCAGAGCAGCTGACAGCTAACAAAGAAAAGGCCGA
TAAGCTGAAAGTTGAGGGCAACGAGTTGTTCAAAAATGACGACGCCGAAG
GCGCCGCCAAGACCTACACAGAAGCCTTAGACATTTGCCCCTCGGCCAGC
TCCAAGGAGCGAGCAGTTCTCTACGGAAACAGGGCTGCTGCCAAGATTAA
GCTGGAGGCCAACAAAGCGGCCATCGACGACTGCACAAAGGCTATAGAAC
TGTGGCCGGAGTATGTGAGGGTGCTTTTAAGGCGCGCCAAGCTCTATGAG
CAAGAAGACAAGCCCGACGAGGCTCTGGAGGACTACAAAAAAGTTACTGA
GATCGATCCCGGTCAGCAGGAGGCTCGCGAGGCTCAGATTCGGCTGCCGC
CAATTATAAACGAGCGCAACGAGAAGCTCAAAAACGAGATGATGTCCAGC
TTAAAGGACCTGGGCAACATGATACTCAAACCGTTCGGACTGTCTACACA
GAATTTCCAAATGCAACAGGATCCCAACACGGGCTCGTATTCCATCAACT
TTAAATAAAAGCTTTCTAGACCAT

BS22170.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-RB 792 CG14894-PB 1..792 17..808 3960 100 Plus
CG14894-RA 792 CG14894-PA 1..792 17..808 3960 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:28
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-RB 1111 CG14894-RB 91..884 17..810 3970 100 Plus
CG14894-RA 948 CG14894-RA 91..884 17..810 3970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:24
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 16442402..16442917 532..17 2580 100 Minus
3R 32079331 3R 16442070..16442350 810..530 1405 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:59:26 has no hits.

BS22170.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:23 Download gff for BS22170.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..880 17..806 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:29 Download gff for BS22170.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..880 17..806 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:38 Download gff for BS22170.complete
Subject Subject Range Query Range Percent Splice Strand
CG14894-RA 91..880 17..806 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:38 Download gff for BS22170.complete
Subject Subject Range Query Range Percent Splice Strand
3R 16442074..16442348 532..806 100 <- Minus
3R 16442403..16442917 17..531 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:29 Download gff for BS22170.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 12267796..12268070 532..806 100 <- Minus
arm_3R 12268125..12268639 17..531 100   Minus

BS22170.pep Sequence

Translation from 16 to 807

> BS22170.pep
MAGNANSDDEFHDAIGEEITEKEATSTRQSEKDVDEIVEKQNQLALDDEA
EQGAAGGDSIATPTTVDSELTIEELREREKDLSPEQLTANKEKADKLKVE
GNELFKNDDAEGAAKTYTEALDICPSASSKERAVLYGNRAAAKIKLEANK
AAIDDCTKAIELWPEYVRVLLRRAKLYEQEDKPDEALEDYKKVTEIDPGQ
QEAREAQIRLPPIINERNEKLKNEMMSSLKDLGNMILKPFGLSTQNFQMQ
QDPNTGSYSINFK*

BS22170.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14894-PB 263 CG14894-PB 1..263 1..263 1331 100 Plus
CG14894-PA 263 CG14894-PA 1..263 1..263 1331 100 Plus
Hop-PA 490 CG2720-PA 289..463 75..254 187 34.7 Plus
unc-45-PA 947 CG2708-PA 4..137 88..220 186 35.3 Plus
Tom70-PC 589 CG6756-PC 61..185 65..189 173 29.6 Plus