Clone BS22178 Report

Search the DGRC for BS22178

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:221
Well:78
Vector:pDNR-Dual
Associated Gene/TranscriptCG7083-RA
Protein status:BS22178.pep: full length peptide match
Sequenced Size:1349

Clone Sequence Records

BS22178.complete Sequence

1349 bp assembled on 2011-02-02

GenBank Submission: KX802422

> BS22178.complete
GAAGTTATCAGTCGACATGCTAGATCTGGAGATCGTGCCGGAGATTTCCC
TGGGCTGCGATGCCTGGGAATTTGTGCTGGGCATGCACTTCTCGCAGGCT
ATCGCCATCATCCAGTCGCAGGTGGGCATCATCAAGGGAGTCCAGGTGCT
GTACTCGGATACCACTCCCCTGGGCGTGGACATCATTATCAACCTGCCAC
AGGATGGCGTTCGCTTGATCTTTGATCCCGTCAGTCAGCGTTTGAAGACC
ATCGAGGTTTTCAACATGAAACTGGTGAAGCTGCGGTATTTCGGCGTATA
CTTCAATTCCCCGGAGGTGCTGCCGAGTATCGAGCAAATCGAGCACTCCT
TTGGAGCCACACATCCTGGGGTTTACGATGCAGCCAAACAATTGTTTGCT
CTACACTTTCGCGGGCTGAGTTTCTACTTTCCGGTGGACAGCAAGCTGCA
CTCGGGCTACGCCCATGGACTGAGTTCTCTGGTTTTCCTGAATGGCGCCT
CACCCGTCGTGTCCAAGATGTCTCTCTACGCAGGCAGCAATGTGTTGGAG
AACAGGGTACCATCTCTTCCCTTGTCCTGCTATCACCGCCAGATGTATTT
GGAATCGGCCACTGTTCTCCGAACCGCCTTTGGTCACACGAAGGGTCTGA
AGCTGAAGCTCTTTACTGAGGGTTCAGGAAGGGCTTTGGAGCCACGCCGT
CAGTGCTTTACGCGAGAGCTGCTCTTCGGCGATAGCTGCGAGGATGTGGC
CACCAGTCTTGGAGCACCCAATCGTATATTCTTCAAGAGCGAGGACAAAA
TGAAGATACACAGCTCGAGTGTCAATCGACAAGCACAGAGCAAGCGAAGC
GATATTTTCTTTAACTACTTTACACTTGGCATCGATGTGCTCTTTGATGC
ACGGACACAGACCTGCAAGAAATTCATTCTGCACACCAACTACCCCGGTC
ACTTCAACTTTAATATGTACCATCGCTGCGAGTTCCAGTTCCTGCTGCAG
GCGGATCACCCTTCGATGAGTGATAGTGGTCACGATTTGGTGACGCCGAC
TAAGCAGGAACATGTGAACATAACCGCCTACACCAAATGGGACGCGATCA
GCAGCGCATTGGCCACCTCAGAGCGGCCAGTGGTGCTGCATCGCGCCAGC
TCGACGAACACAGCGAATCCGTTCGGCTCCACCTTTTGCTATGGCTACCA
AGACCTGATTTTCGAGGTGATGCCCAATAGCCACATCGCCTCGGTAACGC
TCTACAATACTGCGCCTCCCAGGCAGCCAGCGCATTCCTGGCAGCAGCAC
AAAATGCAAGACATTCGCCTCACAGTGGCCTAAAAGCTTTCTAGACCAT

BS22178.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG7083-RA 1317 CG7083-PA 1..1317 17..1333 6570 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:52:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG7083-RA 2029 CG7083-RA 306..1623 17..1334 6575 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:51:58
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 8341153..8342470 17..1334 6575 99.9 Plus
Blast to na_te.dros performed on 2014-11-27 00:51:59 has no hits.

BS22178.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:08 Download gff for BS22178.complete
Subject Subject Range Query Range Percent Splice Strand
CG7083-RA 306..1620 17..1331 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:36:40 Download gff for BS22178.complete
Subject Subject Range Query Range Percent Splice Strand
CG7083-RA 306..1620 17..1331 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:11:54 Download gff for BS22178.complete
Subject Subject Range Query Range Percent Splice Strand
CG7083-RA 306..1620 17..1331 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:11:54 Download gff for BS22178.complete
Subject Subject Range Query Range Percent Splice Strand
3L 8341153..8342467 17..1331 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:36:40 Download gff for BS22178.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 8334253..8335567 17..1331 99   Plus

BS22178.pep Sequence

Translation from 16 to 1332

> BS22178.pep
MLDLEIVPEISLGCDAWEFVLGMHFSQAIAIIQSQVGIIKGVQVLYSDTT
PLGVDIIINLPQDGVRLIFDPVSQRLKTIEVFNMKLVKLRYFGVYFNSPE
VLPSIEQIEHSFGATHPGVYDAAKQLFALHFRGLSFYFPVDSKLHSGYAH
GLSSLVFLNGASPVVSKMSLYAGSNVLENRVPSLPLSCYHRQMYLESATV
LRTAFGHTKGLKLKLFTEGSGRALEPRRQCFTRELLFGDSCEDVATSLGA
PNRIFFKSEDKMKIHSSSVNRQAQSKRSDIFFNYFTLGIDVLFDARTQTC
KKFILHTNYPGHFNFNMYHRCEFQFLLQADHPSMSDSGHDLVTPTKQEHV
NITAYTKWDAISSALATSERPVVLHRASSTNTANPFGSTFCYGYQDLIFE
VMPNSHIASVTLYNTAPPRQPAHSWQQHKMQDIRLTVA*

BS22178.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:36
Subject Length Description Subject Range Query Range Score Percent Strand
CG7083-PA 438 CG7083-PA 1..438 1..438 2295 100 Plus