Clone BS22185 Report

Search the DGRC for BS22185

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:221
Well:85
Vector:pDNR-Dual
Associated Gene/TranscriptCyp12d1-d-RA
Protein status:BS22185.pep: full length peptide match
Sequenced Size:1598

Clone Sequence Records

BS22185.complete Sequence

1598 bp assembled on 2011-02-17

GenBank Submission: KX805200

> BS22185.complete
GAAGTTATCAGTCGACATGAATACATTGAGCAGTGCGCGATCTGTGGCGA
TTTACGTGGGTCCCGTTCGATCTTCAAGATCAGCCTCCGTTTTGGCACAT
GAACAAGCTAAATCTAGTATAACGGAGGAGCACAAGACCTACGATGAGAT
TCCGCGGCCCAACAAATTCAAATTTATGAGGGCTTTCATGCCCGGTGGTG
AATTCCAAAATGCATCGATTACGGAATACACCAGTGCCATGCGAAAGCGC
TATGGAGATATCTATGTAATGCCCGGAATGTTTGGCCGCAAGGATTGGGT
CACCACTTTCAACACAAAGGACATTGAGATGGTATTCCGCAACGAGGGTA
TCTGGCCACGTCGTGATGGCCTGGATTCCATTGTATATTTCCGCGAACAC
GTTCGACCAGATGTTTACGGTGAGGTTCAAGGATTGGTGGCTTCACAAAA
TGAGGCATGGGGAAAACTACGATCAGCCATTAATCCCATCTTTATGCAAC
CCAGGGGCTTGAGAATGTATTATGAACCATTGTCTAATATCAATAATGAG
TTTATAGAGCGCATTAAGGAAATCCGCGATCCAAAAACTCTAGAAGTCCC
CGAAGATTTTACGGATGAAATAAGCCGGCTTGTTTTCGAGTCACTCGGCC
TGGTGGCTTTCGATCGGCAAATGGGTCTGATTAGAAAAAACCGCGATAAT
TCCGATGCATTGACCCTCTTCCAGACCTCGAGGGATATTTTCCGTCTCAC
ATTTAAGCTAGACATTCAGCCCTCCATGTGGAAGATCATATCGACGCCCA
CCTACAGGAAAATGAAGCGAACTCTCAATGACAGTTTGAATGTGTCCCAG
AAAATGCTGAAGGAAAATCAGGATGCACTGGAAAAGCGCCGCCAGGCTGG
CGAAAAAATAAATAGTAACAGTATGCTGGAGAGATTAATGGAGATCGATC
CCAAGGTGGCGGTGATTATGAGTCTGGACATCCTATTCGCTGGTGTGGAT
GCCACAGCCACGCTTCTGTCGGCTGTTTTACTCTGCCTCTCAAAGCATCC
GGATAAGCAGGCCAAACTGCGGGAGGAGCTCTTGAGCATCATGCCCACAA
AGGATTCCCTACTCAACGAGGAGAACATGAAGGATATGCCATATTTGAGG
GCTGTGATCAAGGAGACACTGCGATACTATCCCAATGGCTTTGGAACCAT
GAGAACCTGCCAAAATGATGTGATACTTTCGGGTTACCGGGTGCCCAAGG
GAACGACTGTCCTGCTCGGCTCAAATGTGCTGATGAAGGAAGCTACATAT
TATCCACGACCAGATGAATTTCTGCCGGAGCGCTGGTTAAGGGATCCGGA
GACCGGAAAGAAGATGCAGGTCAGCCCCTTCACGTTCCTTCCCTTTGGCT
TTGGACCCCGCATGTGCATTGGCAAACGGGTGGTGGATCTGGAAATGGAG
ACCACAGTGGCCAAGTTGATTCGCAATTTCCATGTGGAGTTCAATCGGGA
TGCCAGCCGTCCATTCAAGACCATGTTCCTCATGGAACCGGCCATTACGT
TCCCCTTCAAATTCACGGATATCGAACAATAAAAGCTTTCTAGACCAT

BS22185.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:34:48
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp12d1-d-RA 1566 CG33503-PA 1..1566 17..1582 7830 100 Plus
Cyp12d1-p-RB 1566 CG30489-PB 1..1566 17..1582 7785 99.8 Plus
Cyp12d1-p-RA 1566 CG30489-PA 1..1566 17..1582 7785 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:34:49
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp12d1-d-RA 1812 CG33503-RA 34..1599 17..1582 7830 100 Plus
Cyp12d1-p-RB 4482 CG30489-RB 37..1602 17..1582 7785 99.8 Plus
Cyp12d1-p-RA 1741 CG30489-RA 37..1602 17..1582 7785 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:34:45
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11123871..11124892 1582..561 5110 100 Minus
2R 25286936 2R 11120105..11121126 1582..561 5065 99.7 Minus
2R 25286936 2R 11121361..11121686 444..119 1630 100 Minus
2R 25286936 2R 11125127..11125452 444..119 1630 100 Minus
2R 25286936 2R 11121190..11121306 561..445 585 100 Minus
2R 25286936 2R 11124956..11125072 561..445 585 100 Minus
2R 25286936 2R 11121747..11121848 118..17 510 100 Minus
2R 25286936 2R 11125513..11125614 118..17 510 100 Minus
2R 25286936 2R 11123006..11123103 348..251 205 80.6 Minus
2R 25286936 2R 11126772..11126869 348..251 205 80.6 Minus
Blast to na_te.dros performed on 2014-11-27 08:34:46 has no hits.

BS22185.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 10:42:22 Download gff for BS22185.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp12d1-d-RA 1..1558 17..1574 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:32:30 Download gff for BS22185.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp12d1-d-RA 34..1591 17..1574 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:22:29 Download gff for BS22185.complete
Subject Subject Range Query Range Percent Splice Strand
Cyp12d1-d-RA 34..1591 17..1574 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:22:29 Download gff for BS22185.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11125127..11125452 119..444 100 <- Minus
2R 11125513..11125614 17..118 100   Minus
2R 11123879..11124891 562..1574 100 <- Minus
2R 11124956..11125072 445..561 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:32:30 Download gff for BS22185.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7013018..7013119 17..118 100   Minus
arm_2R 7011384..7012396 562..1574 100 <- Minus
arm_2R 7012461..7012577 445..561 100 <- Minus
arm_2R 7012632..7012957 119..444 100 <- Minus

BS22185.pep Sequence

Translation from 16 to 1581

> BS22185.pep
MNTLSSARSVAIYVGPVRSSRSASVLAHEQAKSSITEEHKTYDEIPRPNK
FKFMRAFMPGGEFQNASITEYTSAMRKRYGDIYVMPGMFGRKDWVTTFNT
KDIEMVFRNEGIWPRRDGLDSIVYFREHVRPDVYGEVQGLVASQNEAWGK
LRSAINPIFMQPRGLRMYYEPLSNINNEFIERIKEIRDPKTLEVPEDFTD
EISRLVFESLGLVAFDRQMGLIRKNRDNSDALTLFQTSRDIFRLTFKLDI
QPSMWKIISTPTYRKMKRTLNDSLNVSQKMLKENQDALEKRRQAGEKINS
NSMLERLMEIDPKVAVIMSLDILFAGVDATATLLSAVLLCLSKHPDKQAK
LREELLSIMPTKDSLLNEENMKDMPYLRAVIKETLRYYPNGFGTMRTCQN
DVILSGYRVPKGTTVLLGSNVLMKEATYYPRPDEFLPERWLRDPETGKKM
QVSPFTFLPFGFGPRMCIGKRVVDLEMETTVAKLIRNFHVEFNRDASRPF
KTMFLMEPAITFPFKFTDIEQ*

BS22185.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:22:29
Subject Length Description Subject Range Query Range Score Percent Strand
Cyp12d1-d-PA 521 CG33503-PA 1..521 1..521 2695 100 Plus
Cyp12d1-p-PB 521 CG30489-PB 1..521 1..521 2683 99.4 Plus
Cyp12d1-p-PA 521 CG30489-PA 1..521 1..521 2683 99.4 Plus
Cyp12a4-PA 536 CG6042-PA 29..534 24..519 1143 42.8 Plus
Cyp12a5-PA 536 CG11821-PA 45..534 40..519 1143 45.1 Plus