BS22206.complete Sequence
1196 bp assembled on 2011-01-27
GenBank Submission: KX800565
> BS22206.complete
GAAGTTATCAGTCGACATGGAACAGTCTCAGTCTCAACGGCAGGCGTGGC
CTTCGTCCTCCGCGGGGGGTGGCAAGGCCCAGGACTCCGGGGTGCTGACG
CGCGAGGACTTCGACGGCGGACCGGTCAGCATCGACGAGGTGGACACAGG
CCTGTTTCTAGGCAACCTGACCGCGGCGACGCACATGGAGACGCTGCGCT
CCTTCAAGATCACCCACATCCTCACGCTGGATTCGGTCCCGCTGCCGCAG
CACATTCTGGAGGCCAGCTTTCTGACCACCAAATATATACAGATTGCCGA
CATGCCGCGCGAAGATATTCTGCAGCATCTGGAGGGCTGCGTTGACTTTA
TCAGCTCGGCCCTGGCCCAGCAGGGCAATGTCCTTGTGCACTGCTACTTC
GGCGTCAGTCGCAGCTCATCCACTGTGATCGCTTACATGATGAAGCGACA
CAATCTGGACTTCCTGCCCGCCTACGAGCTGGTCAAGGCCAAACGGCGCT
TCGTCCAGCCAAACGCTGGCTTTGTCAGCCAACTAAAGCTCTTCCGGCGC
ATGGGCTGCAAGATTGACCCCAACTGCCAGCGCTACAAGATCCATCGCCT
GCGCCTGGCTGGCGAGCAGATGCGCAAGGCCAAGATCCTGCCGCAAAGCT
TCCACAGCGTGGTCCGTCCGGATCCAGATATAACGCGCGAGAACCCGGAG
CCCATAGTGTTCCGCTGTCGTCGTTGCCGCCGCGTCCTCGCCTCCAAGTC
GCATGTACTGGAGCACAAGCCGCGTGACAGGCCGCCGCAGGAGGTGGTAC
CCAAGGAGAAAGAAGAAGTCGCTGCAGCTAAGCTGCCGGCTCAGTCACAT
GATCAGGCCGAAAATCATCATGGTGCTCGCATGCTGGAGCAGCTGTCCGA
GCGCATCCGCCAGTCATCACTCGGTTCACCCGGCCACGAAAGCACGCCAA
ACTATTGCCGCAGCATACTGTTTGTGGAGCCCATCGCCTGGATGCACCGC
ATCATGCTGAACACCCAGGGCCGCCTGTACTGTCCCAAGTGCGAGCAGAA
ATTGGGAAACTTTAGCTGGATCAACGCCTGCAAGTGTCCGTGCGGGGAGA
CGATGACGCCTGCATTTTATCTGATACCTTCCAAGGTGGAGCTCTCGAAG
GCCGTGCAGAACGTGCAGACCACGGTTTAGAAGCTTTCTAGACCAT
BS22206.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:01:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-RC | 1164 | CG14211-PC | 1..1164 | 17..1180 | 5820 | 100 | Plus |
| MKP-4-RB | 1164 | CG14211-PB | 1..1164 | 17..1180 | 5820 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:01:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-RC | 1815 | CG14211-RC | 83..1247 | 16..1180 | 5825 | 100 | Plus |
| MKP-4-RB | 2358 | CG14211-RB | 96..1260 | 16..1180 | 5825 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:01:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19623779..19624462 | 393..1076 | 3420 | 100 | Plus |
| X | 23542271 | X | 19623209..19623355 | 16..162 | 735 | 100 | Plus |
| X | 23542271 | X | 19623415..19623548 | 160..293 | 670 | 100 | Plus |
| X | 23542271 | X | 19624527..19624631 | 1076..1180 | 525 | 100 | Plus |
| X | 23542271 | X | 19623615..19623714 | 294..393 | 500 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:01:04 has no hits.
BS22206.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:26 Download gff for
BS22206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MKP-4-RB | 97..1260 | 17..1180 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:14 Download gff for
BS22206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MKP-4-RB | 97..1260 | 17..1180 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:17 Download gff for
BS22206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MKP-4-RB | 97..1260 | 17..1180 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:17 Download gff for
BS22206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19623210..19623354 | 17..161 | 100 | -> | Plus |
| X | 19623417..19623548 | 162..293 | 100 | -> | Plus |
| X | 19623615..19623714 | 294..393 | 100 | -> | Plus |
| X | 19623780..19624462 | 394..1076 | 100 | -> | Plus |
| X | 19624528..19624631 | 1077..1180 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:14 Download gff for
BS22206.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19517243..19517387 | 17..161 | 100 | -> | Plus |
| arm_X | 19517450..19517581 | 162..293 | 100 | -> | Plus |
| arm_X | 19517648..19517747 | 294..393 | 100 | -> | Plus |
| arm_X | 19517813..19518495 | 394..1076 | 100 | -> | Plus |
| arm_X | 19518561..19518664 | 1077..1180 | 100 | | Plus |
BS22206.pep Sequence
Translation from 16 to 1179
> BS22206.pep
MEQSQSQRQAWPSSSAGGGKAQDSGVLTREDFDGGPVSIDEVDTGLFLGN
LTAATHMETLRSFKITHILTLDSVPLPQHILEASFLTTKYIQIADMPRED
ILQHLEGCVDFISSALAQQGNVLVHCYFGVSRSSSTVIAYMMKRHNLDFL
PAYELVKAKRRFVQPNAGFVSQLKLFRRMGCKIDPNCQRYKIHRLRLAGE
QMRKAKILPQSFHSVVRPDPDITRENPEPIVFRCRRCRRVLASKSHVLEH
KPRDRPPQEVVPKEKEEVAAAKLPAQSHDQAENHHGARMLEQLSERIRQS
SLGSPGHESTPNYCRSILFVEPIAWMHRIMLNTQGRLYCPKCEQKLGNFS
WINACKCPCGETMTPAFYLIPSKVELSKAVQNVQTTV*
BS22206.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MKP-4-PC | 387 | CG14211-PC | 1..387 | 1..387 | 2038 | 100 | Plus |
| MKP-4-PB | 387 | CG14211-PB | 1..387 | 1..387 | 2038 | 100 | Plus |
| CG10089-PA | 327 | CG10089-PA | 5..167 | 39..207 | 222 | 32.9 | Plus |
| CG10089-PB | 327 | CG10089-PB | 5..167 | 39..207 | 222 | 32.9 | Plus |
| CG10089-PC | 327 | CG10089-PC | 11..167 | 45..207 | 220 | 33.5 | Plus |
