BS22235.complete Sequence
794 bp assembled on 2011-01-27
GenBank Submission: KX804176
> BS22235.complete
GAAGTTATCAGTCGACATGGAATTTCCACACTTGGGACAGCACTGCAGTG
AGGCAACGTGCAACAGATTGGATTTTCTGCCCGTTAAGTGCGACTCGTGC
GACAAGGTCTTCTGCGCCTCTCACTACAGCTACGACCGCCACAGCTGTCC
AGGAGCCTACAAGAAGAACGTTCAGGTGCCCGTCTGCCCACTGTGTCGGG
AGCCCGTGCCCACGCCACCCGGAGTGGAGCCCGATGTCACTGTTGGCCAG
CACATTGACCAGCAGTGCAAATCGGAGAGCAAGAAGATCTACACCAATCG
CTGCAATGCCAAGGGCTGCAAGCGAAAGGAGCTCATCCCGGTGACCTGCT
CGCAGTGTCGCTTGAACTTTTGCCTGCGTCATCGACACACCAGCGACCAC
GACTGCAAGCCAGTGCCTGCATCTTCGACAACGTCCAGCCGTGGGGGATT
TCAGTCCATATTCAAGACCTCCTCGGACTCACGATCCATGGCTGCCCAGG
CGGCCGAGAGAAGGCAGAACAGAAGGCCCGCGAGCAATAGCATCAGCAAT
ACCAATTCCAGACCTCGACCTGTGCAGGCCACACAAGTACAAAACATACA
GGGCAATATGAGCGAAGACGAGGCCCTAGCACGAGCACTAGCCTTATCCA
TTATGGAGCAGGATGACGCGGCGGAAAGCAACCGTCAAGCTCCGGCACCA
AGCAACGCCCAGCAAGTGGCTGTTGGCGGTGGTGGCAATCAGCAGGGAAA
TGGCAAGGACAAGTGCCTGCTGTCCTAGAAGCTTTCTAGACCAT
BS22235.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:00:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-RB | 762 | CG12795-PB | 1..762 | 17..778 | 3810 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:00:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-RB | 1072 | CG12795-RB | 151..913 | 16..778 | 3815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:00:34
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3452739..3453278 | 71..610 | 2700 | 100 | Plus |
| 2L | 23513712 | 2L | 3453428..3453596 | 610..778 | 845 | 100 | Plus |
| 2L | 23513712 | 2L | 3452616..3452671 | 16..71 | 280 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:00:35 has no hits.
BS22235.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:25 Download gff for
BS22235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 167..928 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:50:02 Download gff for
BS22235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 152..913 | 17..778 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:09:05 Download gff for
BS22235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12795-RB | 152..913 | 17..778 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:09:05 Download gff for
BS22235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3452617..3452671 | 17..71 | 100 | -> | Plus |
| 2L | 3452740..3453278 | 72..610 | 100 | -> | Plus |
| 2L | 3453429..3453596 | 611..778 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:50:02 Download gff for
BS22235.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3452617..3452671 | 17..71 | 100 | -> | Plus |
| arm_2L | 3452740..3453278 | 72..610 | 100 | -> | Plus |
| arm_2L | 3453429..3453596 | 611..778 | 100 | | Plus |
BS22235.pep Sequence
Translation from 16 to 777
> BS22235.pep
MEFPHLGQHCSEATCNRLDFLPVKCDSCDKVFCASHYSYDRHSCPGAYKK
NVQVPVCPLCREPVPTPPGVEPDVTVGQHIDQQCKSESKKIYTNRCNAKG
CKRKELIPVTCSQCRLNFCLRHRHTSDHDCKPVPASSTTSSRGGFQSIFK
TSSDSRSMAAQAAERRQNRRPASNSISNTNSRPRPVQATQVQNIQGNMSE
DEALARALALSIMEQDDAAESNRQAPAPSNAQQVAVGGGGNQQGNGKDKC
LLS*
BS22235.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12795-PB | 253 | CG12795-PB | 1..253 | 1..253 | 1363 | 100 | Plus |
