Clone BS22264 Report

Search the DGRC for BS22264

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:222
Well:64
Vector:pDNR-Dual
Associated Gene/TranscriptCG3517-RA
Protein status:BS22264.pep: full length peptide match
Sequenced Size:1181

Clone Sequence Records

BS22264.complete Sequence

1181 bp assembled on 2011-01-27

GenBank Submission: KX801133

> BS22264.complete
GAAGTTATCAGTCGACATGCAGGCCCATCATGCGATGCCCGATTTCCGAT
GCCGGAATAATTGCCAGCACAAGGAGTGCCAGAGGCATGCTCCTTTGGGC
ATAATCGATCAGCACACCCAGTGCAAGTGCTTGGGCGAGGTAAATGCCTC
ATCGATTTTCCTAGAAAATGTCCTGGACCTGGCCAACACTTTGGCCCAGG
TGATGATCATCTGTGGACTGCACGAGTGCAAAGCGAAATCAACCGTGGAC
ATTATCACATATGCCTTCTTGCATTACGATCAGGTGTGCTATTGCATTGA
TACCACGCCCAAGAAGCGACTGAGAAAGGAGGATTTGTTCCACGAGCTGG
GCAAGAAGTCGCTGATGAACAAGGTGGAGGCCCACTTGGCCTATGCCATC
ATCAAGAGGGGATTCAAGGCCTTCTACTACGAGCCGAAAGTGGACTTGAC
CTACGATGAGCAAGGCAGACCCTCGTACAACGATGAATGCGTCTGGGTCC
ACGCAGCCAGGAAGTCAGCCGAGTCCTATGCCCGCTTCGATGGCCTCTCC
TGCGCCGAACAGTTGGCATACGAGGCCAAGATCAAAATAGCCTTCAAGAA
GTTCTACGATCGCATGCAGACGCGCAAGAGGCAGCCGGAGGGCGACGATT
GCAACTGCTGCTTCTGTGCCAAGAAGCGGGGACATCTGGTCTATGCCAAG
GAACCGACTCCCTGCACTTCCAACAAAAAGAAGCCCAAGCACGTGTGTCC
ATATTGCTGCAAGAAGAAGCAGAAGCAGCAGTACACACACCCTGCTCGCC
AGCCGGCCAAGTGCCCCAAGTGCCACAAGTCGCGCAAGTTCTGCTGCTGC
ACCAAAATGGACTTCAACTTGCAGTGGGTCAAGAGCATATGGGAGCGGCC
GGACTTCAATCAGTACTACAAGAACGAGATCGCCGAAATCGAGGACCGCC
TGGTCAAGGGAACCTGCTGGCTGCCGCCGGAGCCTGAGGAGAAGCTGCTC
GATGAGGGCGAGGGCGAGGAGGAGGAGGAAGCCCACCAGGAAATGTCGCC
GGAGGCTCTCCTCGCCCTCGGCGGCAAAACGGTGCCCACTATACCGGATG
AAGGAAACGGTTCTCCACTGGCCACCAAACAGCCGTCGATCACCGAGGGT
GAGGGCGAGACCTAAAAGCTTTCTAGACCAT

BS22264.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:51:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG3517-RA 1149 CG3517-PA 1..1149 17..1165 5745 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG3517-RA 1421 CG3517-RA 143..1291 17..1165 5745 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:51:57
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 19423909..19425057 1165..17 5745 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:51:57 has no hits.

BS22264.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:10 Download gff for BS22264.complete
Subject Subject Range Query Range Percent Splice Strand
CG3517-RA 143..1289 17..1163 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:26 Download gff for BS22264.complete
Subject Subject Range Query Range Percent Splice Strand
CG3517-RA 143..1289 17..1163 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:23 Download gff for BS22264.complete
Subject Subject Range Query Range Percent Splice Strand
CG3517-RA 143..1289 17..1163 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:23 Download gff for BS22264.complete
Subject Subject Range Query Range Percent Splice Strand
3R 19423911..19425057 17..1163 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:26 Download gff for BS22264.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 15249633..15250779 17..1163 100   Minus

BS22264.pep Sequence

Translation from 16 to 1164

> BS22264.pep
MQAHHAMPDFRCRNNCQHKECQRHAPLGIIDQHTQCKCLGEVNASSIFLE
NVLDLANTLAQVMIICGLHECKAKSTVDIITYAFLHYDQVCYCIDTTPKK
RLRKEDLFHELGKKSLMNKVEAHLAYAIIKRGFKAFYYEPKVDLTYDEQG
RPSYNDECVWVHAARKSAESYARFDGLSCAEQLAYEAKIKIAFKKFYDRM
QTRKRQPEGDDCNCCFCAKKRGHLVYAKEPTPCTSNKKKPKHVCPYCCKK
KQKQQYTHPARQPAKCPKCHKSRKFCCCTKMDFNLQWVKSIWERPDFNQY
YKNEIAEIEDRLVKGTCWLPPEPEEKLLDEGEGEEEEEAHQEMSPEALLA
LGGKTVPTIPDEGNGSPLATKQPSITEGEGET*

BS22264.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG3517-PA 382 CG3517-PA 1..382 1..382 2118 100 Plus
CG13872-PA 613 CG13872-PA 40..207 49..214 281 32.1 Plus
CG9173-PA 433 CG9173-PA 26..287 36..278 259 28.9 Plus