BS22287.complete Sequence
557 bp assembled on 2011-01-27
GenBank Submission: KX802574
> BS22287.complete
GAAGTTATCAGTCGACATGTCCGCCCTAAAAAAATTTTATAAAATCAGCG
CAGGTGTGAGAAGAGGCGCACTACTTACCAGTTCCCGAAGAACACAAATT
GATGCTTTAAATAGTCCACAATTGCAGTTGCAAGTGCATCACTTTGCAAC
CAAAACACAAACAGCTGTTTTTAGCAGCAGCAACAACTACACGTGCATTT
GCCGCAGTATACACTGCAGTAAGCCAGTGGACGATGCGGACAAGACGGTG
GCCACGAATAGCATTCCTCTGGCGAAACTGGAGGCCAAGATGCAGCTGAT
CTACACCTGCAAGGTGTGCCAGACCCGGAACATGAAGACCATTTCGAAGC
TGGCATACCAACGCGGCGTTGTTATCGTGACCTGCGAGGGCTGCTCCAAT
CACCACCTGATCGCCGACAATCTGAACTGGTTCACAGATCTGGACGGCAA
GCGCAACATCGAGGAGATCCTGGCCGAGAAGGGCGAGAAGGTGGTTCGCC
TGACCGATGGCAACTGCGAGTTTTTGCCGAAACATGATTAAAAGCTTTCT
AGACCAT
BS22287.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:59:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-RB | 525 | CG12379-PB | 1..525 | 17..541 | 2625 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:59:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-RB | 618 | CG12379-RB | 74..599 | 17..542 | 2630 | 100 | Plus |
| CG8191-RA | 1486 | CG8191-RA | 1064..1377 | 542..229 | 1570 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:59:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 15733241..15733554 | 542..229 | 1570 | 100 | Minus |
| X | 23542271 | X | 15733710..15733923 | 230..17 | 1070 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 15:59:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6866 | 116..228 | 127 | 60.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6770..6879 | 116..221 | 109 | 58.6 | Plus |
BS22287.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:24 Download gff for
BS22287.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 17..539 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:49:41 Download gff for
BS22287.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 74..596 | 17..539 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:48 Download gff for
BS22287.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG12379-RB | 74..596 | 17..539 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:48 Download gff for
BS22287.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 15733711..15733923 | 17..229 | 100 | | Minus |
| X | 15733244..15733553 | 230..539 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:49:41 Download gff for
BS22287.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 15627277..15627586 | 230..539 | 100 | <- | Minus |
| arm_X | 15627744..15627956 | 17..229 | 100 | | Minus |
BS22287.pep Sequence
Translation from 16 to 540
> BS22287.pep
MSALKKFYKISAGVRRGALLTSSRRTQIDALNSPQLQLQVHHFATKTQTA
VFSSSNNYTCICRSIHCSKPVDDADKTVATNSIPLAKLEAKMQLIYTCKV
CQTRNMKTISKLAYQRGVVIVTCEGCSNHHLIADNLNWFTDLDGKRNIEE
ILAEKGEKVVRLTDGNCEFLPKHD*
BS22287.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG12379-PB | 174 | CG12379-PB | 1..174 | 1..174 | 909 | 100 | Plus |
| CG8206-PB | 191 | CG8206-PB | 97..179 | 87..159 | 194 | 44.6 | Plus |
| CG8206-PA | 191 | CG8206-PA | 97..179 | 87..159 | 194 | 44.6 | Plus |
