BS22301.complete Sequence
1523 bp assembled on 2011-02-02
GenBank Submission: KX803243
> BS22301.complete
GAAGTTATCAGTCGACATGAAGCGTGAAATGAACGATGAAGGGGAGGGAC
CACAGGACCAGAAGCGCAATCGCCGCAACGAGGAGACCGTTCGCATACTG
ATTCCGAGCAGTATTGCTGGGGCTGTCATTGGCAAAGGAGGACAGCACAT
TCAGAAGATGAGGACTCAGTATAAAGCCACTGTGTCTGTCGACGATTCCC
AAGGCCCCGAACGAACCATCCAAATATCGGCGGATATAGAGTCCACATTG
GAGATTATCACCGAAATGCTGAAATACTTTGAGGAGCGCGACGAGGACTT
TGATGTGCGTCTACTTATACACCAGAGCTTGGCCGGCTGCGTCATTGGCA
AAGGTGGACAAAAGATCAAGGAGATCCGCGATCGCATCGGCTGCCGCTTT
TTGAAGGTCTTCTCGAATGTGGCACCACAGAGCACAGATCGAGTGGTGCA
GACCGTTGGCAAGCAGAGCCAGGTCATCGAAGCGGTTCGTGAGGTGATCA
CACTTACACGGGACACTCCCATCAAGGGGGCGATACATAACTATGATCCT
ATGAACTTTGACCGCGTATATGCCGATGAGTACGGTGGCTATGGCACTGG
AAGTGGCAGTACCCGTCCAAGTCAGCGGGGAAACAATCGTAACGGAGGAG
GCGCTGGAGGTGTTGCCGGCGGCGCAGCCGGTGGCAATGGTGGAGGATTC
AATGCTGGCGGTGCACGCGGCAATGCTGGCGGACGTGGCGGAGCTGATCG
CTTTGGCGGCGCCGCTGGTGGAGCTGTGGCCGGTGCTGGAATGGGGCAGC
GCGACAATCCGTTCATTAATCCGTGGGCCAATGGCGGTGGCGGTGATGTA
GATGGTTTTGGCAACAACGCTGGTGGTGCTGGTGGATTTGCCGGTAACAG
CTTTGGCGGTGGCGCCGGTGGACCATTCGGAGGTGGTAGCTTTGGCAACA
ACGGTTTCGGAGGTGGACCCAGCGACTTTGGCGGAAATTCCGGAAACTTT
GGACAGGCCCAGGGCACTAACAGTCTGCCAAGCCTTGGTAGCTTCAGCCA
GAACCAGGGTGGCACTAGCAGCCTGCCCAGCTTGGGCAGCTTTGGTCAGA
ATCCAGGCGGACCCGGTGGATTGGGTAACGGACTGAGTGGCGGTGCTAAT
GGCGGCGTTGGAACCCTGGGTGGTGCTAATGGAGCCGGTGGCTTTAATGC
TGTCGGTGGAGCTAACGGTGGGCCGAATGGCAGCCCAAATGCCGCGACAA
ATGTGCCTCAGGGTCATGATCCCAACAACAGCACACAGGTCACCATTCCA
AAAGAGCTGGCTGGTGCCATCATTGGTAAGGGAGGTGGCCGCATCCGTCG
CATCCGCAACGAGTCCAGTGCGTACATCACCATCGACGAGCCCCTGCCAA
ACTCGAACGATCGTATCATCACCATCTCGGGCACGCCGAAGCAAATACAA
ATGGCCCAGTATCTGCTGCAACAGAGCGTACACGAGAATGGCAGGCGAAA
CATTTAAAAGCTTTCTAGACCAT
BS22301.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:53:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bl-RF | 1491 | CG13425-PF | 1..1491 | 17..1507 | 7455 | 100 | Plus |
| bl-RC | 1509 | CG13425-PC | 19..1509 | 17..1507 | 7455 | 100 | Plus |
| bl-RA | 1491 | CG13425-PA | 1..1491 | 17..1507 | 7455 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:53:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bl-RF | 2078 | CG13425-RF | 208..1698 | 17..1507 | 7455 | 100 | Plus |
| bl-RC | 2127 | CG13425-RC | 257..1747 | 17..1507 | 7455 | 100 | Plus |
| bl-RA | 2076 | CG13425-RA | 206..1696 | 17..1507 | 7455 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 20604696..20605623 | 383..1310 | 4625 | 99.9 | Plus |
| 2R | 25286936 | 2R | 20605680..20605851 | 1305..1476 | 860 | 100 | Plus |
| 2R | 25286936 | 2R | 20598597..20598694 | 285..382 | 490 | 100 | Plus |
| 2R | 25286936 | 2R | 20595568..20595663 | 17..112 | 480 | 100 | Plus |
| 2R | 25286936 | 2R | 20598452..20598525 | 213..286 | 370 | 100 | Plus |
| 2R | 25286936 | 2R | 20595758..20595814 | 113..169 | 285 | 100 | Plus |
| 2R | 25286936 | 2R | 20597545..20597591 | 167..213 | 235 | 100 | Plus |
Blast to na_te.dros performed 2014-11-27 00:53:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 3655..3701 | 1127..1081 | 127 | 74.5 | Minus |
BS22301.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:11 Download gff for
BS22301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bl-RC | 303..1791 | 17..1505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:37:24 Download gff for
BS22301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bl-RA | 206..1694 | 17..1505 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:12:31 Download gff for
BS22301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| bl-RA | 206..1694 | 17..1505 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:12:31 Download gff for
BS22301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 20595568..20595663 | 17..112 | 100 | -> | Plus |
| 2R | 20595758..20595814 | 113..169 | 100 | -> | Plus |
| 2R | 20597548..20597591 | 170..213 | 100 | -> | Plus |
| 2R | 20598453..20598525 | 214..286 | 100 | -> | Plus |
| 2R | 20598599..20598694 | 287..382 | 100 | -> | Plus |
| 2R | 20604696..20605619 | 383..1306 | 100 | -> | Plus |
| 2R | 20605682..20605851 | 1307..1476 | 100 | -> | Plus |
| 2R | 20606444..20606472 | 1477..1505 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:37:24 Download gff for
BS22301.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 16483073..16483168 | 17..112 | 100 | -> | Plus |
| arm_2R | 16483263..16483319 | 113..169 | 100 | -> | Plus |
| arm_2R | 16485053..16485096 | 170..213 | 100 | -> | Plus |
| arm_2R | 16485958..16486030 | 214..286 | 100 | -> | Plus |
| arm_2R | 16486104..16486199 | 287..382 | 100 | -> | Plus |
| arm_2R | 16492201..16493124 | 383..1306 | 100 | -> | Plus |
| arm_2R | 16493187..16493356 | 1307..1476 | 100 | -> | Plus |
| arm_2R | 16493949..16493977 | 1477..1505 | 100 | | Plus |
BS22301.pep Sequence
Translation from 16 to 1506
> BS22301.pep
MKREMNDEGEGPQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRT
QYKATVSVDDSQGPERTIQISADIESTLEIITEMLKYFEERDEDFDVRLL
IHQSLAGCVIGKGGQKIKEIRDRIGCRFLKVFSNVAPQSTDRVVQTVGKQ
SQVIEAVREVITLTRDTPIKGAIHNYDPMNFDRVYADEYGGYGTGSGSTR
PSQRGNNRNGGGAGGVAGGAAGGNGGGFNAGGARGNAGGRGGADRFGGAA
GGAVAGAGMGQRDNPFINPWANGGGGDVDGFGNNAGGAGGFAGNSFGGGA
GGPFGGGSFGNNGFGGGPSDFGGNSGNFGQAQGTNSLPSLGSFSQNQGGT
SSLPSLGSFGQNPGGPGGLGNGLSGGANGGVGTLGGANGAGGFNAVGGAN
GGPNGSPNAATNVPQGHDPNNSTQVTIPKELAGAIIGKGGGRIRRIRNES
SAYITIDEPLPNSNDRIITISGTPKQIQMAQYLLQQSVHENGRRNI*
BS22301.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:05:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| bl-PF | 496 | CG13425-PF | 1..496 | 1..496 | 2615 | 100 | Plus |
| bl-PC | 502 | CG13425-PC | 7..502 | 1..496 | 2615 | 100 | Plus |
| bl-PA | 496 | CG13425-PA | 1..496 | 1..496 | 2615 | 100 | Plus |
| bl-PE | 493 | CG13425-PE | 1..486 | 1..486 | 2562 | 100 | Plus |
| bl-PB | 413 | CG13425-PB | 1..413 | 84..496 | 2200 | 100 | Plus |
