Clone BS22311 Report

Search the DGRC for BS22311

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:223
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG34215-RA
Protein status:BS22311.pep: gold
Sequenced Size:347

Clone Sequence Records

BS22311.complete Sequence

347 bp assembled on 2011-01-27

GenBank Submission: KX801927

> BS22311.complete
GAAGTTATCAGTCGACATGCGTTCATCTACCGTGCTACTTGCGGCAATCG
CCGTTCTCTTAGTTTCGGGCTACGAAGCTGCCGTTGTCCGAGGCGTCTTC
GAGGATCCAACCCATCCTGGAAAGTGTGTTCTCGAGGGTTTGGTTCTTGA
AAAAGGTCAAAGTGCACGCCACCCACAGAGGTGTGAGCGAATCATATGCG
GAGAAAATAGTGCGGCAGAAATCCAATCATGTGGTGCCTATGGACTTCCC
CCCGGCAAAAAGTTTGGAAAGTACACAAACCCAAACGCAGATTACCCTGA
TTGCTGTAATCGTGAGATTATCAACCAGTAAAAGCTTTCTAGACCAT

BS22311.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:35:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-RA 315 CG34215-PA 1..315 17..331 1575 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:35:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-RA 444 CG34215-RA 32..346 17..331 1575 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:35:50
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 6831551..6831762 228..17 1060 100 Minus
2R 25286936 2R 6831394..6831496 331..229 515 100 Minus
Blast to na_te.dros performed on 2014-11-26 21:35:51 has no hits.

BS22311.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:49 Download gff for BS22311.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 30..342 17..329 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:10 Download gff for BS22311.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..344 17..329 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:27 Download gff for BS22311.complete
Subject Subject Range Query Range Percent Splice Strand
CG34215-RA 32..344 17..329 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:27 Download gff for BS22311.complete
Subject Subject Range Query Range Percent Splice Strand
2R 6831396..6831496 229..329 100 <- Minus
2R 6831551..6831762 17..228 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:10 Download gff for BS22311.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 2718901..2719001 229..329 100 <- Minus
arm_2R 2719056..2719267 17..228 100   Minus

BS22311.pep Sequence

Translation from 16 to 330

> BS22311.pep
MRSSTVLLAAIAVLLVSGYEAAVVRGVFEDPTHPGKCVLEGLVLEKGQSA
RHPQRCERIICGENSAAEIQSCGAYGLPPGKKFGKYTNPNADYPDCCNRE
IINQ*

BS22311.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG34215-PA 104 CG34215-PA 1..104 1..104 554 100 Plus
CG34177-PA 107 CG34177-PA 5..105 4..102 203 39.6 Plus
CG2444-PB 114 CG2444-PB 11..107 6..100 136 32 Plus
CG2444-PA 114 CG2444-PA 11..107 6..100 136 32 Plus