BS22312.complete Sequence
2042 bp assembled on 2011-02-18
GenBank Submission: KX803608
> BS22312.complete
GAAGTTATCAGTCGACATGAACAACAGCCCCAAGGATCCCTATCGTGGAG
GAGGAGGAGGTTCTGGACCCCAGGATGGCGCTGGATCGACCGGTGTGTCT
ATCAACATCGAGAGCGACGACAATGACTCGACGACGGCGGAACACGACTA
CCTGCTGCCTGCCTCCTCATCTTCGGTGACCTCTGGTGGTGGCGTCGGAG
GTGGAGGCGTCGTCTCTGGAGGATCGACCAGCACCAGCGTAAACCTGGAC
CACCAACACGTTCCCACGGCGCGGAGCAGCAGCCTTAGTGGTGGTAATGT
CCGTCATGGTAACATTCTATCCACATTTTTGGCCCGTCAGCGCTCGTACA
CGCCAGCCAGCAACAGCAGTTCCCCGGTGCGGGTGACCACACAGATGAAC
CGTCGTCTTCAGCAGTCCCGTAGTATGGGCGCCAACACCGGTGGCAGTCT
CGAGGAGCCGTCCAGCGCCGGAGCAGCAGGTGGACCAGGAGCATCGCCAG
GAACTGCGGCAGGTGTTCGACAAATGGGCTTTTGGCGTGTCAACCTCAAC
GATGTCTTTTCGCTTTCAACTGCCTCGTCGACAGAGGCGCTCCGATCCTT
CATCTCACATTCCAATTTTAGATATCCACCTGCAACCACTGCAGCCCCCG
CGGCACCAGGACCTCAGCCAGCCGCCAATCCCGTAGACAACTCGCACATA
CTGCTCGGCCAGCAGCAACCATCAATGCCTGAGCCAGTCAGCCCTCTGCG
ATACGGGCGCGTTTCGGCCGTATCTGGAGCCAGTTCAGCTGGAGCTATGG
GTAGAAGTATCTCGCTGCGTGAGGGTGAGATGCGACACAATCACAGCCTT
AACGGAGGACGGCACAATGCCAGTGCCATAGGACTAAACAGCAATCCGGC
GGCCTTCGACGAACGCGAAGCAAATGAGAGCCAAGACCTTGACGAAAGCG
ATGGCAACGTGGAGAACGGAGGTGGAGGTGGCAATCCACCAGAGCCAGCA
GAGAATAATCCAGAGGATGAACATCTCATCTCGGATGACATGGTGGTCCA
GATTCTCAGCCATTTTGTGCGATATCTGCCGCTTATCTTTATACTGTTTT
TCAAGTTTTTACACGACCACCTGCTGGGCATTGTGGATCTTCTGGTGCTG
CAGACTGTGATGTATAATGTTAACCGATCAGTACGCAATCAGGTAGCCCG
TCTAGCTCAGAAGAACTACGCCGTGATGGTGCGGGATACTTTCCTCGTTG
CCGTGGTGGTTACAGTGCGTCTATTTTTGGCCACTTCGCCGCCAGATCCG
TTTGGACTGATTGTGCCGCCTTCCAGAAAATCCGTTTTCATAGAGGTCAC
AGCGCTGCCTTTTCACACTAGCTCGGAAGGCGACAGCCCCACAACATCGT
CCGAACCCATCAAGACCAACATGTACAAAGATACGTACAAATCTCTAAAT
GTGATCCCACTGGGCATGTTGCTGTACTACATTGCTGTGAGCGATCTCAT
TATCAAACTGCTGACAATGCTGGTCAAACTTATTATTACCATGCTGCCGC
ACCACTTGATGAGACTTAAAGTGCGGGCTAGGCTTTATGTGTTGGTGGAG
TACATTTCGCAGTTCTACCGGGCAATGACACCCATTACCCAGTGGCTCCT
ATTTCTATACGAGTCCTACTCCGGCCTGGAGGTGGTTTCCGGAGGACTCT
TTTCCGCAATGTACCTGGGTGCCAAGATATTTGAGCTGGTGGAGCGCGGC
AAGTCGCTAAAGAAAGCCATTGTGACCTTCAGAAAAAATATTGACTCTGA
GCGGCCGCCGACCAAAGACGAGCTGGATGCTGCGGGTGCCCTGTGTCCAA
TCTGCCATGACGCCTTCAACACACCCACTGTGTTGGAGTGCGGCCACATT
TTCTGTGATGAGTGCGTCCAGACCTGGTTCAAGCGCGAACAGACCTGTCC
GATGTGCAGGGCGAAGGTTAGCGATGATCCCGCCTGGCAGGACGGCAGCA
CTACCTTCTTCCATCAGTTGTACTAGAAGCTTTCTAGACCAT
BS22312.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:27:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13605-RB | 2010 | CG13605-PB | 1..2010 | 17..2026 | 10050 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:27:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13605-RB | 2174 | CG13605-RB | 68..2077 | 17..2026 | 10050 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:27:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 24110762..24112322 | 1577..17 | 7805 | 100 | Minus |
| 3R | 32079331 | 3R | 24110041..24110274 | 2026..1793 | 1170 | 100 | Minus |
| 3R | 32079331 | 3R | 24110332..24110549 | 1793..1576 | 1090 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 14:27:23 has no hits.
BS22312.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:38:05 Download gff for
BS22312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 81..2090 | 17..2026 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:34:45 Download gff for
BS22312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 68..2077 | 17..2026 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:53:04 Download gff for
BS22312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13605-RB | 68..2077 | 17..2026 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 15:53:04 Download gff for
BS22312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 24110041..24110274 | 1793..2026 | 100 | <- | Minus |
| 3R | 24110333..24110548 | 1577..1792 | 100 | <- | Minus |
| 3R | 24110763..24112322 | 17..1576 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:34:45 Download gff for
BS22312.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 19935763..19935996 | 1793..2026 | 100 | <- | Minus |
| arm_3R | 19936055..19936270 | 1577..1792 | 100 | <- | Minus |
| arm_3R | 19936485..19938044 | 17..1576 | 100 | | Minus |
BS22312.pep Sequence
Translation from 16 to 2025
> BS22312.pep
MNNSPKDPYRGGGGGSGPQDGAGSTGVSINIESDDNDSTTAEHDYLLPAS
SSSVTSGGGVGGGGVVSGGSTSTSVNLDHQHVPTARSSSLSGGNVRHGNI
LSTFLARQRSYTPASNSSSPVRVTTQMNRRLQQSRSMGANTGGSLEEPSS
AGAAGGPGASPGTAAGVRQMGFWRVNLNDVFSLSTASSTEALRSFISHSN
FRYPPATTAAPAAPGPQPAANPVDNSHILLGQQQPSMPEPVSPLRYGRVS
AVSGASSAGAMGRSISLREGEMRHNHSLNGGRHNASAIGLNSNPAAFDER
EANESQDLDESDGNVENGGGGGNPPEPAENNPEDEHLISDDMVVQILSHF
VRYLPLIFILFFKFLHDHLLGIVDLLVLQTVMYNVNRSVRNQVARLAQKN
YAVMVRDTFLVAVVVTVRLFLATSPPDPFGLIVPPSRKSVFIEVTALPFH
TSSEGDSPTTSSEPIKTNMYKDTYKSLNVIPLGMLLYYIAVSDLIIKLLT
MLVKLIITMLPHHLMRLKVRARLYVLVEYISQFYRAMTPITQWLLFLYES
YSGLEVVSGGLFSAMYLGAKIFELVERGKSLKKAIVTFRKNIDSERPPTK
DELDAAGALCPICHDAFNTPTVLECGHIFCDECVQTWFKREQTCPMCRAK
VSDDPAWQDGSTTFFHQLY*
BS22312.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:31:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13605-PB | 669 | CG13605-PB | 1..669 | 1..669 | 3467 | 100 | Plus |
