BS22313.complete Sequence
266 bp assembled on 2011-01-27
GenBank Submission: KX804452
> BS22313.complete
GAAGTTATCAGTCGACATGAAAGTACTCCTGGCTTTAACTTTCCTGGCCA
CTTTGGCTCTTTCAGTGGCCCTTCCCCAGGTGGGACATGGATCTGTAAAT
GGACCCAGTGGGCGCTTCCCTATGACGAAGAATTGGGCGCAACCTCCGGT
TGATTTGCGAAAACCCATTATCTTTCTGCCAGAGGCCACGCCCATTCACG
AAGCCCAGGAGTCGCGCCCCCGACTAGCCAAACATCGCAAGAGTGGATAG
AAGCTTTCTAGACCAT
BS22313.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:37:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34193-RB | 234 | CG34193-PB | 1..234 | 17..250 | 1170 | 100 | Plus |
| CG34193-RA | 234 | CG34193-PA | 1..234 | 17..250 | 1170 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:37:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34193-RB | 2333 | CG34193-RB | 989..1223 | 17..251 | 1175 | 100 | Plus |
| CG34193-RA | 806 | CG34193-RA | 58..292 | 17..251 | 1175 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:37:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 17510145..17510284 | 112..251 | 700 | 100 | Plus |
| 2R | 25286936 | 2R | 17509983..17510078 | 17..112 | 480 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:37:07 has no hits.
BS22313.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:52 Download gff for
BS22313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34193-RA | 34..267 | 17..250 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:39 Download gff for
BS22313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34193-RA | 40..273 | 17..250 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:37:55 Download gff for
BS22313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG34193-RA | 58..291 | 17..250 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:37:55 Download gff for
BS22313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 17509983..17510078 | 17..112 | 100 | -> | Plus |
| 2R | 17510146..17510283 | 113..250 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:39 Download gff for
BS22313.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 13397488..13397583 | 17..112 | 100 | -> | Plus |
| arm_2R | 13397651..13397788 | 113..250 | 100 | | Plus |
BS22313.pep Sequence
Translation from 16 to 249
> BS22313.pep
MKVLLALTFLATLALSVALPQVGHGSVNGPSGRFPMTKNWAQPPVDLRKP
IIFLPEATPIHEAQESRPRLAKHRKSG*
BS22313.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG34193-PB | 77 | CG34193-PB | 1..77 | 1..77 | 398 | 100 | Plus |
| CG34193-PA | 77 | CG34193-PA | 1..77 | 1..77 | 398 | 100 | Plus |
