BS22316.complete Sequence
593 bp assembled on 2011-01-27
GenBank Submission: KX804769
> BS22316.complete
GAAGTTATCAGTCGACATGCTGTCCAGGGTCTTCTGTATGCGCCTGAACA
CCTATGGTGTGGTCATTGGATGGCTGGGCGTGATTCTATCCTTCTTGGCC
ACGATCCTCTTGTCCTTGGCCCTCGGATTCGTCGATGAAATTGCGCAGCA
GATCGCCAAGGGATCGGAAGATTCTAACAAGACGGCCACCGAGATTCGCA
GTGTGCTAATCATCGTTTTCAGTGTTTACCTGGCGCTCAAGGTGATTAAT
CTTCTGGCTTCGGCCATGTTGGTTGCAGGTACCGTTAAGGAACGCCATTT
ACTCCTGCTGCCCTGGCTGATCAACAATGGAGTGCTGCTTGTCTTTGGAA
TTATCACCAATATTGCAATGCTGGCCCAGATCATCGGAAATACATCTTTC
CTGAGCGCTCTTCCAATCATTTTCGTGGATGTTGGCCTGCTCTTGCTGAC
CTGGTATCTCTACTACGGCATCTACTCGCTCTTCAAGCAGATCCAGGCAT
CCCGTGAGATCCAGCGCCCGCTGATCCCACAGCCGACCCAGCAGACCAAC
TCCTATCCCAGCTACACCAAGATTTAAAAGCTTTCTAGACCAT
BS22316.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:37:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-RA | 561 | CG15098-PA | 1..561 | 17..577 | 2805 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:37:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-RA | 953 | CG15098-RA | 114..674 | 17..577 | 2805 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:37:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 18834476..18834662 | 203..17 | 935 | 100 | Minus |
| 2R | 25286936 | 2R | 18833965..18834120 | 443..288 | 780 | 100 | Minus |
| 2R | 25286936 | 2R | 18833651..18833784 | 577..444 | 670 | 100 | Minus |
| 2R | 25286936 | 2R | 18834310..18834397 | 290..203 | 440 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 21:37:50 has no hits.
BS22316.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:53 Download gff for
BS22316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 110..668 | 17..575 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:31:58 Download gff for
BS22316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 114..672 | 17..575 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:15 Download gff for
BS22316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15098-RA | 114..672 | 17..575 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:15 Download gff for
BS22316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 18834476..18834662 | 17..203 | 100 | | Minus |
| 2R | 18833653..18833784 | 444..575 | 100 | <- | Minus |
| 2R | 18833965..18834118 | 290..443 | 100 | <- | Minus |
| 2R | 18834311..18834396 | 204..289 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:31:58 Download gff for
BS22316.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 14721158..14721289 | 444..575 | 100 | <- | Minus |
| arm_2R | 14721470..14721623 | 290..443 | 100 | <- | Minus |
| arm_2R | 14721816..14721901 | 204..289 | 100 | <- | Minus |
| arm_2R | 14721981..14722167 | 17..203 | 100 | | Minus |
BS22316.pep Sequence
Translation from 16 to 576
> BS22316.pep
MLSRVFCMRLNTYGVVIGWLGVILSFLATILLSLALGFVDEIAQQIAKGS
EDSNKTATEIRSVLIIVFSVYLALKVINLLASAMLVAGTVKERHLLLLPW
LINNGVLLVFGIITNIAMLAQIIGNTSFLSALPIIFVDVGLLLLTWYLYY
GIYSLFKQIQASREIQRPLIPQPTQQTNSYPSYTKI*
BS22316.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15098-PA | 186 | CG15098-PA | 1..186 | 1..186 | 917 | 100 | Plus |
| CG13747-PA | 222 | CG13747-PA | 24..183 | 2..160 | 156 | 26.4 | Plus |
