Clone BS22344 Report

Search the DGRC for BS22344

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:223
Well:44
Vector:pDNR-Dual
Associated Gene/TranscriptCG34232-RA
Protein status:BS22344.pep: gold
Sequenced Size:441

Clone Sequence Records

BS22344.complete Sequence

441 bp assembled on 2011-01-27

GenBank Submission: KX805887

> BS22344.complete
GAAGTTATCAGTCGACATGTTGAAGGCGATTATCGTTTTTGCCACTATCT
TGGTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAGCGAACC
CATCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCACCACCA
CCAAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGAAACATG
GTGGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGAAAGGCC
AGGCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCAGAAGGA
GCACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGCATTCCA
AGGGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGCCACTAG
AAGCTTTCTAGACCATTCGTTTGGCGCGCGTTTTTTTTTTT

BS22344.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34232-RC 384 CG34232-PC 1..384 17..400 1920 100 Plus
CG34232-RA 384 CG34232-PA 1..384 17..400 1920 100 Plus
CG34232-RB 390 CG34232-PB 18..390 28..400 1865 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:40:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34232-RC 775 CG34232-RC 178..562 16..400 1925 100 Plus
CG34232-RA 702 CG34232-RA 105..489 16..400 1925 100 Plus
CG34232-RB 831 CG34232-RB 246..618 28..400 1865 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:40:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12165122..12165494 400..28 1865 100 Minus
Blast to na_te.dros performed 2014-11-26 21:40:22
Subject Length Description Subject Range Query Range Score Percent Strand
gypsy12 10218 gypsy12 GYPSY12 10218bp 696..737 295..336 111 73.8 Plus
gypsy12 10218 gypsy12 GYPSY12 10218bp 8578..8619 295..336 111 73.8 Plus

BS22344.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:55 Download gff for BS22344.complete
Subject Subject Range Query Range Percent Splice Strand
CG34232-RA 91..469 22..400 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:14 Download gff for BS22344.complete
Subject Subject Range Query Range Percent Splice Strand
CG34232-RA 91..469 22..400 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:12 Download gff for BS22344.complete
Subject Subject Range Query Range Percent Splice Strand
CG34232-RA 111..489 22..400 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:12 Download gff for BS22344.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12165122..12165497 22..400 98   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:14 Download gff for BS22344.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8052627..8053002 22..400 98   Minus

BS22344.pep Sequence

Translation from 16 to 399

> BS22344.pep
MLKAIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKLQE
VRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQQQ
DNHTRKSRSHSKGSKQHHKRHTGSRRH*

BS22344.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG34232-PC 127 CG34232-PC 1..127 1..127 696 100 Plus
CG34232-PA 127 CG34232-PA 1..127 1..127 696 100 Plus
CG34232-PB 129 CG34232-PB 7..129 5..127 678 100 Plus