BS22344.complete Sequence
441 bp assembled on 2011-01-27
GenBank Submission: KX805887
> BS22344.complete
GAAGTTATCAGTCGACATGTTGAAGGCGATTATCGTTTTTGCCACTATCT
TGGTGGCCGTGGCCATGGCCATGCAGCCACTGGAGGACAATGAGCGAACC
CATCATCTGAACCACAAGCGCCAGTTGTCGCAACAGCACCACCACCACCA
CCAAAAGCTCCAGGAGGTGAGGCATTCGGGCCATGATAGTCTGAAACATG
GTGGTTCCCACGTTAAGGAGCATCAAGCGCATCACTCTGAGCGAAAGGCC
AGGCAGAGCCACAAGGAGCCGGGCCACAAGAAGAGTCACCACCAGAAGGA
GCACCGCCAGCAGCAGGACAACCACACCCGCAAATCCCGATCGCATTCCA
AGGGCAGCAAGCAGCATCACAAGCGGCACACGGGATCGCGTCGCCACTAG
AAGCTTTCTAGACCATTCGTTTGGCGCGCGTTTTTTTTTTT
BS22344.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:40:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RC | 384 | CG34232-PC | 1..384 | 17..400 | 1920 | 100 | Plus |
CG34232-RA | 384 | CG34232-PA | 1..384 | 17..400 | 1920 | 100 | Plus |
CG34232-RB | 390 | CG34232-PB | 18..390 | 28..400 | 1865 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:40:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-RC | 775 | CG34232-RC | 178..562 | 16..400 | 1925 | 100 | Plus |
CG34232-RA | 702 | CG34232-RA | 105..489 | 16..400 | 1925 | 100 | Plus |
CG34232-RB | 831 | CG34232-RB | 246..618 | 28..400 | 1865 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:40:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12165122..12165494 | 400..28 | 1865 | 100 | Minus |
Blast to na_te.dros performed 2014-11-26 21:40:22
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 696..737 | 295..336 | 111 | 73.8 | Plus |
gypsy12 | 10218 | gypsy12 GYPSY12 10218bp | 8578..8619 | 295..336 | 111 | 73.8 | Plus |
BS22344.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:55 Download gff for
BS22344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 91..469 | 22..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:14 Download gff for
BS22344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 91..469 | 22..400 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:12 Download gff for
BS22344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34232-RA | 111..489 | 22..400 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:12 Download gff for
BS22344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12165122..12165497 | 22..400 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:14 Download gff for
BS22344.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8052627..8053002 | 22..400 | 98 | | Minus |
BS22344.pep Sequence
Translation from 16 to 399
> BS22344.pep
MLKAIIVFATILVAVAMAMQPLEDNERTHHLNHKRQLSQQHHHHHQKLQE
VRHSGHDSLKHGGSHVKEHQAHHSERKARQSHKEPGHKKSHHQKEHRQQQ
DNHTRKSRSHSKGSKQHHKRHTGSRRH*
BS22344.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34232-PC | 127 | CG34232-PC | 1..127 | 1..127 | 696 | 100 | Plus |
CG34232-PA | 127 | CG34232-PA | 1..127 | 1..127 | 696 | 100 | Plus |
CG34232-PB | 129 | CG34232-PB | 7..129 | 5..127 | 678 | 100 | Plus |