BS22346.complete Sequence
980 bp assembled on 2011-01-27
GenBank Submission: KX802501
> BS22346.complete
GAAGTTATCAGTCGACATGCCGCAAATGGGCGATCTTATGCAGTTGCTGA
CCGAGCTGCAGAACGATCCAGAGCCATTCGAGGCTAAGCAGAAGACGCTG
GACTTCTTCATCTCCTGCAACGTGCACCACGCGCTGGAAGACTGCTATCG
TGAGACCTATGAGTATTTCAAGCCACTTTTCGGGTATATAGTTACAAAAA
ACATGCTCAATGGAGAATCCCACGAGCTGGATGACTTTCTGGGCATTTTG
GACCGCTTCGTCGTCAGGTTTCAGAAGGACAGAGAGTCGAATCCCATTCT
CAGCAAGCTGGCCACGTATAAGCAGAAATTTAAAACGCCGCGAGTCTACT
TCCATGCTAGAGACCTGAGCCGGGAGTACAAGGACCTGCGGATCTACCGG
GAGAGCTACGAACACAACGTTCGCAATCTGGAGCAGCACAGAAAACTGAA
TTCAACATACGAATTGGGGGTTCAGCGCACCATGCTGGATTGGAGCATGT
ACCTCTTTCAGAGCCGCAACAAGCCCATGTCCTACTTCTACTCCACGTTT
ACGGTCCATTTGTACATGATGCTTTTTAATAGTCTGGAGCGTCAGCGTGA
TTTCACGCGGTTTCGCGAAGATGTGGAGTGTTTAAGGCTGCCGCAGTTCG
TTAATGTTCTGGATGAGGCCAGAATGCTGGCTGTGATCTACTTAAAGAGC
TTCCGAGCGGCCTGGATAGACTACAGCGCCTGGATCAACTCGCCTCCACA
GAACAGTGGGATATACGATCAGGAAAATGGCGTCCTTCAAAAGTACCATC
TTGACAACAAGCGTATATTTTTTACTCTTTACGCTCAGAACTTCTGTGAG
TTTGGGAAGGATCTGGCCGAGCATGTCTTCTATCTGGGCCTTAAACAGAA
CAAGGACTTTTACGACATATACTCTTGTGGATTCCAAACGGAAAACCCTA
TGACTTGTGTTTAAAAGCTTTCTAGACCAT
BS22346.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:39:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1092-RD | 1185 | CG1092-PD | 236..1185 | 15..964 | 4750 | 100 | Plus |
CG1092-RC | 1185 | CG1092-PC | 236..1185 | 15..964 | 4750 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:39:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1092-RD | 1310 | CG1092-RD | 258..1210 | 15..967 | 4765 | 100 | Plus |
CG1092-RC | 1492 | CG1092-RC | 440..1392 | 15..967 | 4765 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:39:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 4267264..4268216 | 15..967 | 4765 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:39:27 has no hits.
BS22346.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:54 Download gff for
BS22346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RB | 295..1240 | 17..962 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:32:45 Download gff for
BS22346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RC | 442..1387 | 17..962 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:38:50 Download gff for
BS22346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG1092-RC | 442..1387 | 17..962 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:38:50 Download gff for
BS22346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 4267266..4268211 | 17..962 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:32:45 Download gff for
BS22346.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 92988..93933 | 17..962 | 100 | | Plus |
BS22346.pep Sequence
Translation from 16 to 963
> BS22346.pep
MPQMGDLMQLLTELQNDPEPFEAKQKTLDFFISCNVHHALEDCYRETYEY
FKPLFGYIVTKNMLNGESHELDDFLGILDRFVVRFQKDRESNPILSKLAT
YKQKFKTPRVYFHARDLSREYKDLRIYRESYEHNVRNLEQHRKLNSTYEL
GVQRTMLDWSMYLFQSRNKPMSYFYSTFTVHLYMMLFNSLERQRDFTRFR
EDVECLRLPQFVNVLDEARMLAVIYLKSFRAAWIDYSAWINSPPQNSGIY
DQENGVLQKYHLDNKRIFFTLYAQNFCEFGKDLAEHVFYLGLKQNKDFYD
IYSCGFQTENPMTCV*
BS22346.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG1092-PD | 394 | CG1092-PD | 80..394 | 1..315 | 1695 | 100 | Plus |
CG1092-PC | 394 | CG1092-PC | 80..394 | 1..315 | 1695 | 100 | Plus |