Clone BS22350 Report

Search the DGRC for BS22350

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:223
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG17760-RB
Protein status:BS22350.pep: full length peptide match
Sequenced Size:1094

Clone Sequence Records

BS22350.complete Sequence

1094 bp assembled on 2011-02-02

GenBank Submission: KX800949

> BS22350.complete
GAAGTTATCAGTCGACATGGACTGCTGCCTATCGGACCAGGCTTGTGAGG
AAAGGCGTATCAGCAGGGAAATTGATAAGTTCCTGAAAGCGGAAAAGAAG
AAAGCTCGACGTGAACTTAAGCTATTGGTCCTGGGCACAGGTGAATCGGG
CAAGACCACATTCATCAAACAAATGCGCATCATTCACGGCAAAGGATTTT
TGGACAAGGAGAGGAAGCAGTTCACCAAAAATGTTTTCCAAAACATATTC
ATGGCCATACAGTCGATGATCAGTGCAATGGATACTCTGCGAATTCCCTA
CGGTCAGCAGGAGCATAGTAAACTTGCCGATCTGGTGAAGAGCATCGATT
ACAAGACAGTTACCAGACTGGAGGCGCCCTACTTGAATGCCATCAAAACT
CTTTGGAAAGATGCTGGCATCAAGGAGTGCTACAATCGTCGTAGGGAATA
TCAGCTGACTGATTCAACTGAATACTTTTTGAATGACATAGCGCGAATTG
AACGGAGTGATTACCAGGCCACTGATCAGGACATTCTTCATGTTCGAGCG
CCAACAACCAATATTGTTGAGTATCCCTTCAATTTGGACGGTTTTCTGAT
AAGATTGGTGGACGTCGCTGGTCAGCGAACGGAGAGAAGAAAGTGGATTC
ATTGTTTTTCCAATGTGACATCAATTATGTTTTTGGTTGCCATGTCCGAG
TTTGATCTATCCTTGGCTGAATCGGAGAATGATAATCGTATGAAGGAATC
TAAAGCTTTATTTCACAATATAATATCGTTTTCATGGTTTCAACACTCGT
CCGTTATTCTGTTTCTAAACAAGGAGGATTTATTTAAAAAGAAAATATTG
TCAACGCATTTGGCAGACTATTTTCCTGAATATAATGGTCCAAAGAAGGA
TGCTAAGGCGGCCCGAGAATTCATATTGTACATGTTTACTAGCGTGAATC
CTGATCCTTACAAGTGCATCTATCCTCATTTCACCGTTGCTACAAATACT
GAAAATATTAAGTTCGTGTTCACTGCTGTCAAGGACACAATTCTGGAATT
GCATTTAAGTGAAACTAATTTGCTGTGAAAGCTTTCTAGACCAT

BS22350.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG17760-RB 1062 CG17760-PB 1..1062 17..1078 5310 100 Plus
Galphaq-RD 1062 CG17759-PD 115..885 131..901 1410 78.9 Plus
CG30054-RE 1062 CG30054-PE 93..1033 109..1049 1255 75.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG17760-RB 1535 CG17760-RB 375..1437 16..1078 5315 100 Plus
Galphaq-RD 1615 CG17759-RD 548..1318 131..901 1410 78.9 Plus
CG30054-RE 1062 CG30054-RE 93..1033 109..1049 1255 75.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12626983..12627168 134..319 930 100 Plus
2R 25286936 2R 12627971..12628126 734..889 780 100 Plus
2R 25286936 2R 12627237..12627391 320..474 775 100 Plus
2R 25286936 2R 12627785..12627916 602..733 660 100 Plus
2R 25286936 2R 12627598..12627726 475..603 645 100 Plus
2R 25286936 2R 12626798..12626917 16..135 600 100 Plus
2R 25286936 2R 12628193..12628301 887..995 545 100 Plus
2R 25286936 2R 12624150..12624303 321..474 500 88.3 Plus
2R 25286936 2R 12616788..12616933 321..466 460 87.7 Plus
2R 25286936 2R 12628439..12628521 996..1078 415 100 Plus
2R 25286936 2R 12617987..12618142 734..889 300 79.5 Plus
2R 25286936 2R 12617793..12617923 602..732 295 81.7 Plus
2R 25286936 2R 12624565..12624645 606..686 225 85.2 Plus
2R 25286936 2R 12623919..12624086 152..319 210 75 Plus
2R 25286936 2R 12624754..12624909 734..889 195 75 Plus
Blast to na_te.dros performed on 2014-11-27 00:55:10 has no hits.

BS22350.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-14 14:32:15 Download gff for BS22350.complete
Subject Subject Range Query Range Percent Splice Strand
CG17760-RB 351..1411 17..1077 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:38:32 Download gff for BS22350.complete
Subject Subject Range Query Range Percent Splice Strand
CG17760-RB 376..1436 17..1077 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:13:35 Download gff for BS22350.complete
Subject Subject Range Query Range Percent Splice Strand
CG17760-RB 376..1436 17..1077 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:13:35 Download gff for BS22350.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12628194..12628301 888..995 100 -> Plus
2R 12628439..12628520 996..1077 100   Plus
2R 12626799..12626916 17..134 100 -> Plus
2R 12626984..12627168 135..319 100 -> Plus
2R 12627237..12627391 320..474 100 -> Plus
2R 12627598..12627726 475..603 100 -> Plus
2R 12627787..12627916 604..733 100 -> Plus
2R 12627971..12628124 734..887 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:38:32 Download gff for BS22350.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8514304..8514421 17..134 100 -> Plus
arm_2R 8514489..8514673 135..319 100 -> Plus
arm_2R 8514742..8514896 320..474 100 -> Plus
arm_2R 8515103..8515231 475..603 100 -> Plus
arm_2R 8515292..8515421 604..733 100 -> Plus
arm_2R 8515476..8515629 734..887 100 -> Plus
arm_2R 8515699..8515806 888..995 100 -> Plus
arm_2R 8515944..8516025 996..1077 100   Plus

BS22350.pep Sequence

Translation from 16 to 1077

> BS22350.pep
MDCCLSDQACEERRISREIDKFLKAEKKKARRELKLLVLGTGESGKTTFI
KQMRIIHGKGFLDKERKQFTKNVFQNIFMAIQSMISAMDTLRIPYGQQEH
SKLADLVKSIDYKTVTRLEAPYLNAIKTLWKDAGIKECYNRRREYQLTDS
TEYFLNDIARIERSDYQATDQDILHVRAPTTNIVEYPFNLDGFLIRLVDV
AGQRTERRKWIHCFSNVTSIMFLVAMSEFDLSLAESENDNRMKESKALFH
NIISFSWFQHSSVILFLNKEDLFKKKILSTHLADYFPEYNGPKKDAKAAR
EFILYMFTSVNPDPYKCIYPHFTVATNTENIKFVFTAVKDTILELHLSET
NLL*

BS22350.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:06:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG17760-PB 353 CG17760-PB 1..353 1..353 1830 100 Plus
CG30054-PE 353 CG30054-PE 1..352 1..352 1279 68.5 Plus
Galphaq-PD 353 CG17759-PD 1..352 1..352 1267 66.8 Plus
Galphaq-PK 353 CG17759-PK 1..353 1..353 1261 66.9 Plus
Galphaq-PE 353 CG17759-PE 1..353 1..353 1261 66.9 Plus