BS22351.complete Sequence
434 bp assembled on 2011-01-27
GenBank Submission: KX801532
> BS22351.complete
GAAGTTATCAGTCGACATGTCTGCACCGCTAGAGAACCTTGAGACCCAGC
TAGAGATGTTCATCGAGAATGTTCGTCAGATCCGCATAATCGTAAGCGAT
TTTCAGCCACAGGGTCAAAATGTACTCAACCAGAAAATTAACAGCTTGGT
GACCGGCCTACAAGAGATCGACAAGCTGCGCTCCCAGGTGCAGGACGTCT
ATGTGCCATTTGAAGTGTTTTTTGACTACATCGACCAAGACAAGAATCCT
CAGCTGTACACCAAGGATTGCGTGGAGAAGGCACTGGCCAAGAACGAGGA
GGTCAAGGGCAAGATCGAGGGCCTGAAGAAGTTCAAAACGAATCTGCTGC
TGGAGCTGTATAAAACATTTCCCAATGAGATGAACAACTACCGCGCTTAT
CGCAAGGACTCCATGTAAAAGCTTTCTAGACCAT
BS22351.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:41:27
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-RB | 402 | CG5057-PB | 1..402 | 17..418 | 2010 | 100 | Plus |
MED10-RC | 402 | CG5057-PC | 1..402 | 17..418 | 2010 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:41:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-RB | 597 | CG5057-RB | 119..520 | 17..418 | 2010 | 100 | Plus |
MED10-RC | 638 | CG5057-RC | 119..520 | 17..418 | 2010 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:41:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 16232380..16232659 | 139..418 | 1400 | 100 | Plus |
3L | 28110227 | 3L | 16232202..16232323 | 17..138 | 610 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:41:26 has no hits.
BS22351.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:57 Download gff for
BS22351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RB | 174..573 | 17..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:33:49 Download gff for
BS22351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RC | 119..518 | 17..416 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:39:41 Download gff for
BS22351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
MED10-RC | 119..518 | 17..416 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:39:41 Download gff for
BS22351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 16232380..16232657 | 139..416 | 100 | | Plus |
3L | 16232202..16232323 | 17..138 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:33:49 Download gff for
BS22351.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 16225302..16225423 | 17..138 | 100 | -> | Plus |
arm_3L | 16225480..16225757 | 139..416 | 100 | | Plus |
BS22351.pep Sequence
Translation from 16 to 417
> BS22351.pep
MSAPLENLETQLEMFIENVRQIRIIVSDFQPQGQNVLNQKINSLVTGLQE
IDKLRSQVQDVYVPFEVFFDYIDQDKNPQLYTKDCVEKALAKNEEVKGKI
EGLKKFKTNLLLELYKTFPNEMNNYRAYRKDSM*
BS22351.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:51:57
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
MED10-PB | 133 | CG5057-PB | 1..133 | 1..133 | 680 | 100 | Plus |
MED10-PC | 133 | CG5057-PC | 1..133 | 1..133 | 680 | 100 | Plus |