Clone BS22354 Report

Search the DGRC for BS22354

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:223
Well:54
Vector:pDNR-Dual
Associated Gene/TranscriptCG13982-RA
Protein status:BS22354.pep: full length peptide match
Sequenced Size:1022

Clone Sequence Records

BS22354.complete Sequence

1022 bp assembled on 2011-01-27

GenBank Submission: KX801706

> BS22354.complete
GAAGTTATCAGTCGACATGGGTTCATGCCTTGGCAGCTGTGCCACAGCTG
CCGCCGCACCAGCCCACTCCGCCTGCACCTCAACGTCCGACTCCACCACC
CACTCGACTTCCTCGACGTCGTCTTCACTGACAACTCCCCCCACGTCCTG
GGTGGCCAACAGCTGGCTCTGGCGAAAGAACAGATCTGCAGGAAGACAAG
ATCCAGAGGCAGATCTCTTATCGAGGACCACCAGGCAGCGCTGCCAACGG
AACGGATTCATCTACCGCATCCTGCGGCTCAAGAAAAGGCAGCAGTGTCC
CAGCTTCCTGGACAAGTACTGGGAGCAGCAGCCCAGCTACGCCAAGCTGC
CGACCACCGCCATGGCGGACATTCAAATGCAGAACCTGGACGCCGGCAAG
TTGCTCAACGCCCAGACCACGCCCAGTCGGGAGACGGAGATGGGACTTGG
AGCCTACCAGCGCATGGCCAACTCGCGGGCCAGCTCCTCCTTGGATCTCG
AGTGGGAACACGAGTACTCACAGCTGCGGCAGTATCAGTACCAGTGCCAG
CAGGTGCCCAAGGAGCTGCCACCAACGCCACCAAAGCCGCGCTACGCATC
CTTAGACCAGCTGGCGGCAGCCAATGCGATGGCCACCAGCCAAGGACGAC
ACATGGCGCGCCAAGCCAGACTGAGTTGCCAGCGCCACGGAGGTTCGCTC
ACGCGGAACTCGTGCTGTTCGTCTACGCAAAACTCCTGGTCGCACATATC
CACGCCAGAGTCGCTGGAATGGGACGTGGACGAGGAGCGAGAGCAGCAGC
GTCAGCTTCGTCTGGAGGATGACAATCTGGATGATAGAACGCTCAAGTTG
CTGCATCAGATCGAGCAATTGAAGCACCATGTACTGCAGGAGACTGGCGA
TGGACTCAGCATGGAATCAGCTGCGGTCGAGGAGCTCACCGAGGGCCTTC
AGTTCCGGGCAACGCACTTCGCTGGCGACTCCCAGCTGGAGGCCCATGTA
AGTTGAAAGCTTTCTAGACCAT

BS22354.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13982-RB 990 CG13982-PB 1..990 17..1006 4950 100 Plus
CG13982-RA 990 CG13982-PA 1..990 17..1006 4950 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:42:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG13982-RB 1726 CG13982-RB 389..1379 16..1006 4955 100 Plus
CG13982-RA 2643 CG13982-RA 389..1379 16..1006 4955 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:42:16
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 6413423..6414071 358..1006 3245 100 Plus
2L 23513712 2L 6413180..6413366 171..357 935 100 Plus
2L 23513712 2L 6412703..6412859 16..172 785 100 Plus
Blast to na_te.dros performed 2014-11-26 21:42:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Ulysses 10653 Dvir\Ulysses DVULYSS 10653bp AKA(S37633) Derived from X56645 (Rel. 38, Last updated, Version 6). 4160..4230 521..592 123 65.3 Plus

BS22354.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:58 Download gff for BS22354.complete
Subject Subject Range Query Range Percent Splice Strand
CG13982-RA 390..1378 17..1005 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:34:14 Download gff for BS22354.complete
Subject Subject Range Query Range Percent Splice Strand
CG13982-RA 390..1378 17..1005 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:40:05 Download gff for BS22354.complete
Subject Subject Range Query Range Percent Splice Strand
CG13982-RA 390..1378 17..1005 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:40:05 Download gff for BS22354.complete
Subject Subject Range Query Range Percent Splice Strand
2L 6412704..6412858 17..171 100 -> Plus
2L 6413181..6413366 172..357 100 -> Plus
2L 6413423..6414070 358..1005 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:34:14 Download gff for BS22354.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 6412704..6412858 17..171 100 -> Plus
arm_2L 6413181..6413366 172..357 100 -> Plus
arm_2L 6413423..6414070 358..1005 100   Plus

BS22354.pep Sequence

Translation from 16 to 1005

> BS22354.pep
MGSCLGSCATAAAAPAHSACTSTSDSTTHSTSSTSSSLTTPPTSWVANSW
LWRKNRSAGRQDPEADLLSRTTRQRCQRNGFIYRILRLKKRQQCPSFLDK
YWEQQPSYAKLPTTAMADIQMQNLDAGKLLNAQTTPSRETEMGLGAYQRM
ANSRASSSLDLEWEHEYSQLRQYQYQCQQVPKELPPTPPKPRYASLDQLA
AANAMATSQGRHMARQARLSCQRHGGSLTRNSCCSSTQNSWSHISTPESL
EWDVDEEREQQRQLRLEDDNLDDRTLKLLHQIEQLKHHVLQETGDGLSME
SAAVEELTEGLQFRATHFAGDSQLEAHVS*

BS22354.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG13982-PB 329 CG13982-PB 1..329 1..329 1731 100 Plus
CG13982-PA 329 CG13982-PA 1..329 1..329 1731 100 Plus