BS22361.complete Sequence
878 bp assembled on 2011-02-15
GenBank Submission: KX804975
> BS22361.complete
GAAGTTATCAGTCGACATGGACATCATGGATATCCAGGCCGTAGAGTCCA
AGCTGAGTGACGTCACGGTGACACCGATACCGCGCAGCCAAGTGCAGAAT
TTCTACAATTACCAGCAGCAGCGGGAGCAGCGCGAGCAGCAGCCCCAAAT
CCAGATATCGGCCATCCACCACTCGCGTGGATCCGTTGGCGGAGGAGGCG
GATCCAACTCATCCAACGCTGCCACCGACTACTCCACGAGCAGCGGTGGC
AAGCGGGAGCGGGACCGCTCCTCCGCCAGCGACTACAGCAGCTCGTCCAG
CAAGCAGAGCTCCGCTGCAGCGGCCAATGCAGCAGCAGCTGCCGCCGCCG
TCGCTGCCCTCCAATACTCCCCGCAGTTCCTCCAGGCCCAGCTGGCGCTA
CTCCAGCAGCAGTCGAACACGACGGCCACGCCGGCAGCCGTCGCCGCTGC
GGCCCTCTCGCTGGCCAACATGTGCTCCAGCAATGGTGGTCAGCGGAATT
CCGGTGCCGGCGTTTCCTCCACCTCCTCTGGCAGCAATGGCCAGAGCATG
GGCCTGAATCTGAGCTCATCGCAGCTAAAGTACCCGCCACCCTCCACCTC
GCCCGTGGTGGTGACCACCCAAACTTCGGCCAATATCACCACGCCGCTGA
CCTCCACGGCCAGCCTGCCCTCAGTGGGCCCGGGCAATGGGCTGACCAAG
TACGCCCAGCTGCTGGCCGTCATTGAGGAGATGGGCCGCGATATCCGGCC
CACGTACACGGGCTCGCGCAGCTCCACGGAGCGTCTCAAGCGGGGCATTG
TCCATGCCCGCATCCTGGTGCGCGAATGCCTCATGGAAACGGAGCGTGCG
GCGCGCCAATGAAAGCTTTCTAGACCAT
BS22361.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:56:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-RB | 888 | CG18292-PB | 1..846 | 17..862 | 4230 | 100 | Plus |
| CG18292-RA | 846 | CG18292-PA | 1..846 | 17..862 | 4230 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:56:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-RB | 1831 | CG18292-RB | 198..1044 | 16..862 | 4235 | 100 | Plus |
| CG18292-RA | 1831 | CG18292-RA | 198..1044 | 16..862 | 4235 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 01:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 11138056..11138902 | 16..862 | 4235 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 01:56:56 has no hits.
BS22361.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-15 10:19:40 Download gff for
BS22361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 176..1020 | 17..861 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:05:39 Download gff for
BS22361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 199..1043 | 17..861 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:34:47 Download gff for
BS22361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18292-RA | 199..1043 | 17..861 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:34:47 Download gff for
BS22361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 11138057..11138901 | 17..861 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:05:39 Download gff for
BS22361.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11032090..11032934 | 17..861 | 100 | | Plus |
BS22361.pep Sequence
Translation from 16 to 861
> BS22361.pep
MDIMDIQAVESKLSDVTVTPIPRSQVQNFYNYQQQREQREQQPQIQISAI
HHSRGSVGGGGGSNSSNAATDYSTSSGGKRERDRSSASDYSSSSSKQSSA
AAANAAAAAAAVAALQYSPQFLQAQLALLQQQSNTTATPAAVAAAALSLA
NMCSSNGGQRNSGAGVSSTSSGSNGQSMGLNLSSSQLKYPPPSTSPVVVT
TQTSANITTPLTSTASLPSVGPGNGLTKYAQLLAVIEEMGRDIRPTYTGS
RSSTERLKRGIVHARILVRECLMETERAARQ*
BS22361.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:11:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18292-PA | 281 | CG18292-PA | 1..281 | 1..281 | 1380 | 100 | Plus |
| CG18292-PB | 295 | CG18292-PB | 1..281 | 1..281 | 1380 | 100 | Plus |
| oc-PE | 539 | CG12154-PE | 103..331 | 21..225 | 160 | 27.2 | Plus |
| oc-PD | 542 | CG12154-PD | 106..334 | 21..225 | 160 | 27.2 | Plus |
| oc-PG | 542 | CG12154-PG | 106..334 | 21..225 | 160 | 27.2 | Plus |
