BS22373.complete Sequence
1091 bp assembled on 2011-01-27
GenBank Submission: KX806392
> BS22373.complete
GAAGTTATCAGTCGACATGTTTGCCACGCCCCTCAGACAGCCAGCTGCGG
CTAACCACCAGACCCCAAAGAATTCCGCCGGCATGGATGAGCATGGTAAG
CCGTATCAGTACGAGATTACCGATCACGGATACGGCAAGGATGCGGTCAA
GGTGCTGCATGTCAGCCGCAACGGACCCGTGCACGCCATCCAGGAATTCG
AGGTGGGCACTCACCTGAAGTTGTACAGCAAAAAGGATTACTACCAGGGC
AACAACTCGGACATCGTGGCCACCGATTCGCAGAAGAACACCGTCTATTT
GCTGGCGAAAAAGCATGGCATTGAAAGTCCCGAGAAGTTTGCTCTGCTCC
TGGCCAGGCACTTTATTAACAAATACTCGCACGTGGAGGAGGCGCACGTT
CATGTGGAGGCGTATCCCTGGCAGCGAGTTTGCCAGGAGGAGACCAGGAC
CAACGTCAATGGGAAGTGCGAGAACGGAGTCCAAGGGAACTGCGACTTCA
GCTCCATTGACAACAGATCACTGCACAATCACGCTTTTATATTCACGCCC
ACCGCTCTTCACTACTGCGATGTGGTTATAAGGAGAACAGATCCCAAACA
AACGGTCATCACGGGCATCAAGGGTCTCCGGGTGCTGAAGACGACCCAAT
CCTCGTTCGTGAACTTCGTGAACGATGAGTTCAGATCTCTGCCAGATCAG
TATGATCGCATCTTTAGCACCGTGGTGGATTGCTCCTGGGAGTACTCCGA
TACCGAGAACTTGGACTTCCTCAGGGCCTGGCAAACGGTCAAAAACATAA
TCATTCGTAACTTTGCTGGCGATCCGCAGGTGGGCGTGTCCTCGCCCTCC
GTTCAGCACACCCTGTATCTGAGTGAAAGACAGGTCCTGGATGTCCTGCC
GCAGGTGTCGGTCATTTCGATGACCATGCCAAACAAGCACTACTTCAACT
TCGATACGAAGCCCTTCCAGAAGATTGCACCCGGCGACAACAATGAAGTT
TTCATCCCAGTGGACAAGCCACATGGCACCATCTATGCCCAATTGGCCCG
GAAGAACATCAATAGTCACCTGTAGAAGCTTTCTAGACCAT
BS22373.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uro-RA | 1059 | CG7171-PA | 1..1059 | 17..1075 | 5295 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:59:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uro-RA | 1262 | CG7171-RA | 34..1093 | 17..1076 | 5300 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7780118..7780691 | 17..590 | 2870 | 100 | Plus |
| 2L | 23513712 | 2L | 7780759..7781246 | 589..1076 | 2440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 16:59:27 has no hits.
BS22373.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:44 Download gff for
BS22373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uro-RA | 40..1092 | 23..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:15:04 Download gff for
BS22373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uro-RA | 40..1092 | 23..1075 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:32 Download gff for
BS22373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Uro-RA | 40..1092 | 23..1075 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:32:32 Download gff for
BS22373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7780124..7780691 | 23..590 | 100 | -> | Plus |
| 2L | 7780761..7781245 | 591..1075 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:15:04 Download gff for
BS22373.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7780124..7780691 | 23..590 | 100 | -> | Plus |
| arm_2L | 7780761..7781245 | 591..1075 | 100 | | Plus |
BS22373.pep Sequence
Translation from 16 to 1074
> BS22373.pep
MFATPLRQPAAANHQTPKNSAGMDEHGKPYQYEITDHGYGKDAVKVLHVS
RNGPVHAIQEFEVGTHLKLYSKKDYYQGNNSDIVATDSQKNTVYLLAKKH
GIESPEKFALLLARHFINKYSHVEEAHVHVEAYPWQRVCQEETRTNVNGK
CENGVQGNCDFSSIDNRSLHNHAFIFTPTALHYCDVVIRRTDPKQTVITG
IKGLRVLKTTQSSFVNFVNDEFRSLPDQYDRIFSTVVDCSWEYSDTENLD
FLRAWQTVKNIIIRNFAGDPQVGVSSPSVQHTLYLSERQVLDVLPQVSVI
SMTMPNKHYFNFDTKPFQKIAPGDNNEVFIPVDKPHGTIYAQLARKNINS
HL*
BS22373.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Uro-PA | 352 | CG7171-PA | 1..352 | 1..352 | 1882 | 100 | Plus |
