BS22375.complete Sequence
830 bp assembled on 2011-01-27
GenBank Submission: KX801396
> BS22375.complete
GAAGTTATCAGTCGACATGGCTACAACCGCAAGCCAATCCAACTGCTGGC
TGCTGCAGCGCCGCCAGCTGGACAGCATCACAACAGTTCTTGCCGAGATG
ATAGCCACCGCTATGCTGATGTTCCTCGGATGCATGGGCAGTGTGGAGAA
CTCCGTGTTCACCAACTCGGACTTCCAGAGCGCCCTGAACTTCGGATTCG
TGGTGCTAATCTGCATCCAGTGCTTCGGTTGCGTGTGTGGCGCCCACCTG
AATCCCGCCGTCACCCTGGCCACCTACGTCTACAACATGATCTCCCTGCC
GATGGCTTTGGCCTATTTTGTGGCCCAGATGGTGGGCGCCTTCATTGGCT
ACGGCCTGCTGAAGGCGGTGCTCCCGGAGAGCGCCATCTACAGCGCTGAG
AACCCCAATGGCGTCTGCCTCACCTCGCTCAACAGCACCTTGACCCCATG
GCAGGGACTGGCCGTGGAGTTCCTGATCACCTGCGTCCTCATCTCCGTGT
GCTGCGGCGTCTGGGATCCCCGCAATGCCACCAAGCAGGACTCGCTGCCA
GTGCGATTTGGTCTGGCCATCGCATGCCTGTCGCTCACAGCGGGACAACT
GACTGGGGCTAGTATGAATCCAGTCCGATCCTTTGCTCCGGCCATTTGGA
ACGGATTCTGGGATGACCACTGGATCTACTGGGTGGGTCCCATGGCGGCT
GCCCTGATCACCTCGGTGATCTACAAGCACGCCTTCCGGCGGGAGCTGGA
GGAATCGGAGGTGGACGAGACGACGATGTCAACCAAGAGGACCTCGGAGG
CGGAGCTCGCCTAAAAGCTTTCTAGACCAT
BS22375.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 17:00:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17664-RA | 798 | CG17664-PA | 1..798 | 17..814 | 3990 | 100 | Plus |
| CG17664-RC | 873 | CG17664-PC | 90..873 | 31..814 | 3920 | 100 | Plus |
| CG4019-RF | 894 | CG4019-PF | 277..452 | 185..360 | 400 | 81.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:00:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17664-RA | 995 | CG17664-RA | 84..883 | 16..815 | 4000 | 100 | Plus |
| CG17664-RC | 1138 | CG17664-RC | 242..1026 | 31..815 | 3925 | 100 | Plus |
| CG4019-RF | 1271 | CG4019-RF | 413..588 | 185..360 | 400 | 81.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 17:00:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 23604392..23604953 | 593..32 | 2810 | 100 | Minus |
| 2R | 25286936 | 2R | 23603834..23604057 | 815..592 | 1120 | 100 | Minus |
| 2R | 25286936 | 2R | 23608355..23608530 | 360..185 | 400 | 81.8 | Minus |
Blast to na_te.dros performed on 2014-11-26 17:00:08 has no hits.
BS22375.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:45 Download gff for
BS22375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RA | 49..844 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:15:27 Download gff for
BS22375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RA | 85..880 | 17..812 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:32:52 Download gff for
BS22375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17664-RA | 85..880 | 17..812 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:32:52 Download gff for
BS22375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 23603837..23604056 | 593..812 | 100 | <- | Minus |
| 2R | 23604393..23604951 | 34..592 | 100 | <- | Minus |
| 2R | 23605078..23605094 | 17..33 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:15:27 Download gff for
BS22375.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 19491360..19491579 | 593..812 | 100 | <- | Minus |
| arm_2R | 19491916..19492474 | 34..592 | 100 | <- | Minus |
| arm_2R | 19492601..19492617 | 17..33 | 100 | | Minus |
BS22375.pep Sequence
Translation from 16 to 813
> BS22375.pep
MATTASQSNCWLLQRRQLDSITTVLAEMIATAMLMFLGCMGSVENSVFTN
SDFQSALNFGFVVLICIQCFGCVCGAHLNPAVTLATYVYNMISLPMALAY
FVAQMVGAFIGYGLLKAVLPESAIYSAENPNGVCLTSLNSTLTPWQGLAV
EFLITCVLISVCCGVWDPRNATKQDSLPVRFGLAIACLSLTAGQLTGASM
NPVRSFAPAIWNGFWDDHWIYWVGPMAAALITSVIYKHAFRRELEESEVD
ETTMSTKRTSEAELA*
BS22375.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17664-PA | 265 | CG17664-PA | 1..265 | 1..265 | 1387 | 100 | Plus |
| CG17664-PC | 290 | CG17664-PC | 28..290 | 3..265 | 1367 | 99.2 | Plus |
| CG17662-PB | 270 | CG17662-PB | 17..260 | 11..257 | 724 | 54.7 | Plus |
| CG4019-PB | 249 | CG4019-PB | 6..234 | 18..249 | 712 | 55.6 | Plus |
| CG4019-PD | 249 | CG4019-PD | 6..234 | 18..249 | 712 | 55.6 | Plus |
