BS22376.complete Sequence
995 bp assembled on 2011-01-27
GenBank Submission: KX804154
> BS22376.complete
GAAGTTATCAGTCGACATGTCGCTTTTACGCATCAGGAAACCAAAAACCC
GCAAGGGAAAGAAGGTGTTGCTGGCCAGGGAGCCGCAACTCATTGAATCC
GCCCGCACAATGCTGTTTTTGGACGGAAGGAAGTGCGGCGGCAATGTGAA
GCTGTGCATGAAGGACCTGCAGGCGCTGAAGAAGCCGCTGGTTAAAGTGC
TGAACCGCAAAAACGACATTACCCCCTTTGACGATCCCTCATCTCTGGAG
TTCTTGACCATGAAGAACGATGCTGCTTTGTTCACGTTCGGTTCCACGTC
CAAGAAGCGACCCGATAACATTATACTGGGCAGGATCTTCGAGAACGAGG
TGCTGGACATGTTTGAACTGGGCATCAAGCGGTATCAGGCGATTTCCGAG
TTTAAGAACGAGAAAATCGGAGCCTGCGTCAAGCCCTGCCTGGTGTTCAA
TGGTCCGAAATGGGCACAGACCGAGGAACTGAGGCGCCTTCGCAACCTGT
TCATCGACACCTTCCAGCGCGAGAAGGTGGATTCGATCCGGCTGCAGGGC
ATCGAACACGTTCTGAGTTTCACGGTTACCGATGACATGAACATACTGAT
GCGTTCCTACCGGATACTGCTGAAGAAATCTGGCCAGAGGACGCCGCGCA
TAGAGCTTGAAGAGATCGGACCCTCGGCCGACTTCTCCATTCGCCGCACC
AAGATCGCCAGCGAGGATCTGTACAAACAGGCACGCAAACAGCCCAAGCA
GTTGAAGGTGGGCAAGAAGAAGAACATTAGCACAGACGCCCTGGGCAACA
CCAAGGGACGTGTCCATCTGGGCAAGCAGCAAACGGGCTCCATTCAAACG
CGTCGCGTCAAGGCGCTGCGTAAGACGCCGGAGGAGAAGAAGGAGAACCG
ACAGCGCAAGAAGGTTGCTCTGAAGGCGGCCGCCGCCGAAGCACTGGCCT
CACAAGGAAACAATCCCTTCTCTAGTTAAAAGCTTTCTAGACCAT
BS22376.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-RA | 963 | CG7993-PA | 1..963 | 17..979 | 4815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:33:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-RA | 1093 | CG7993-RA | 98..1060 | 17..979 | 4815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:33:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 18224183..18224909 | 253..979 | 3635 | 100 | Plus |
| 3R | 32079331 | 3R | 18223896..18224114 | 34..252 | 1095 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 21:33:58 has no hits.
BS22376.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:46 Download gff for
BS22376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 93..1053 | 17..977 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:30:17 Download gff for
BS22376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7993-RA | 98..1058 | 17..977 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:36:34 Download gff for
BS22376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Non3-RA | 98..1058 | 17..977 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:36:34 Download gff for
BS22376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 18223899..18224114 | 37..252 | 100 | -> | Plus |
| 3R | 18223819..18223838 | 17..36 | 100 | -> | Plus |
| 3R | 18224183..18224907 | 253..977 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:30:17 Download gff for
BS22376.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14049541..14049560 | 17..36 | 100 | -> | Plus |
| arm_3R | 14049621..14049836 | 37..252 | 100 | -> | Plus |
| arm_3R | 14049905..14050629 | 253..977 | 100 | | Plus |
BS22376.pep Sequence
Translation from 16 to 978
> BS22376.pep
MSLLRIRKPKTRKGKKVLLAREPQLIESARTMLFLDGRKCGGNVKLCMKD
LQALKKPLVKVLNRKNDITPFDDPSSLEFLTMKNDAALFTFGSTSKKRPD
NIILGRIFENEVLDMFELGIKRYQAISEFKNEKIGACVKPCLVFNGPKWA
QTEELRRLRNLFIDTFQREKVDSIRLQGIEHVLSFTVTDDMNILMRSYRI
LLKKSGQRTPRIELEEIGPSADFSIRRTKIASEDLYKQARKQPKQLKVGK
KKNISTDALGNTKGRVHLGKQQTGSIQTRRVKALRKTPEEKKENRQRKKV
ALKAAAAEALASQGNNPFSS*
BS22376.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Non3-PA | 320 | CG7993-PA | 1..320 | 1..320 | 1614 | 100 | Plus |
