Clone BS22377 Report

Search the DGRC for BS22377

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:223
Well:77
Vector:pDNR-Dual
Associated Gene/TranscriptCG8501-RA
Protein status:BS22377.pep: full length peptide match
Sequenced Size:491

Clone Sequence Records

BS22377.complete Sequence

491 bp assembled on 2011-01-27

GenBank Submission: KX806117

> BS22377.complete
GAAGTTATCAGTCGACATGGGCAGCGGATCTGAGCTTCCACTACGGATCT
GTATGGTCTGGCTGGTCGCGGGTCTGGCGATTGGCGAGGCACTCCGGTGC
TACGAGTGTGTCGATCAGGAGACGTCGTGCGGATCTGCTGATAATTCGCC
GGGAAGAGTGCGAGAATGCCCGAACTCAACCATGTGCTCGACCACCATGC
TGACCACAATGGTGAATGGAAATGAGTGGATCAGGGTGAGGCGAGGCTGT
GCCAAGCAGGTGGATCATTACTTTGACTATATTGGAAAGCATTGGGAGCA
GAAGTATCGACTGATGGACTTACCGGAGGGCTGCAAGAAGGAGAATGGAA
GGATGAATTGCAACTGTCGCGGAGAACTGTGCAATTCAGGAAGTCATTCG
ACACCAAATTTCCGGTTGCCGTTCGTGCTGATCTTATTGGCCCTGGTCTG
CGGCAAAATCCTTCTTCCCGTCTAGAAGCTTTCTAGACCAT

BS22377.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:34:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-RB 459 CG8501-PB 1..459 17..475 2280 99.8 Plus
CG8501-RA 459 CG8501-PA 1..459 17..475 2280 99.8 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:34:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-RB 629 CG8501-RB 18..477 16..475 2285 99.8 Plus
CG8501-RA 1077 CG8501-RA 466..925 16..475 2285 99.8 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 21:34:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 12383909..12384368 16..475 2285 99.8 Plus
Blast to na_te.dros performed on 2014-11-26 21:34:05 has no hits.

BS22377.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:06:46 Download gff for BS22377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 291..749 17..475 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 03:30:21 Download gff for BS22377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 467..925 17..475 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 22:36:38 Download gff for BS22377.complete
Subject Subject Range Query Range Percent Splice Strand
CG8501-RA 467..925 17..475 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 22:36:38 Download gff for BS22377.complete
Subject Subject Range Query Range Percent Splice Strand
2R 12383910..12384368 17..475 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 03:30:21 Download gff for BS22377.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 8271415..8271873 17..475 99   Plus

BS22377.pep Sequence

Translation from 16 to 474

> BS22377.pep
MGSGSELPLRICMVWLVAGLAIGEALRCYECVDQETSCGSADNSPGRVRE
CPNSTMCSTTMLTTMVNGNEWIRVRRGCAKQVDHYFDYIGKHWEQKYRLM
DLPEGCKKENGRMNCNCRGELCNSGSHSTPNFRLPFVLILLALVCGKILL
PV*

BS22377.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:58:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG8501-PB 152 CG8501-PB 1..152 1..152 840 100 Plus
CG8501-PA 152 CG8501-PA 1..152 1..152 840 100 Plus