BS22383.complete Sequence
1391 bp assembled on 2011-01-27
GenBank Submission: KX800609
> BS22383.complete
GAAGTTATCAGTCGACATGGCCCACACCCGCCGTCCCAGCGACGGCCTGC
TGGCCCGCGTGAACTTCCCGCTGTACGCCGTGGACATGCTAACCAGCCGC
CACATTCTGGTAGCCGGAGGCGGTGGCTCCAGCAAAACGGGAGTGGCGAA
CGGCTTTGAGATCTATGAGCTGTACCACAACGGCAGCCACTTCTGCGCGG
AGGAGGTTTTGCGCCATGAGACCGGCGCCAATGTGGTGATGAACTTCGCG
GTGCGCAATGGCGGCCGGAGGGGCTATCTGTGCGCCGGCCAGGAGGCGCA
CTGTCAGATGTACTACGTCCAGCCGCGCGTTCAATCCGAAGAGGATGGGA
ATGGAAACGGTGTGGGCGTCGGGGACGGCAAGCCTGCTCCGGAGGAACGG
CCGCACGAGAACGGCAACGTGCGCCAGCGAAACGCACACTCGGGCGTGGA
GCCAGTGGCCAACGGGCACAGGCCACCCCTTTCCACCGCCGACATATTGC
GTCAGTTTCGGCGACTGCATTTCGACATCCAGGCGGCGGATGTGATCCAG
ACGGACTTCCTCAAGGGCGCCGAGCCCCTGCAGCGCGTGGTGCGCATCAG
CGGTAATGGCCGTCTGATGGCCACTGGCGGCACGGACGGAAAACTGCGCG
TCTGGACGTTCCCCCAGATGACGCTGGCCGCCGAGCTGGCGGCACACAGC
AAGGAGATCGATGACCTGGACTTCAGTCCCGACAGCAAGCTAATTGCCAG
CATCTCCAAGGATGCACAGGGCTTGGTGTGGGACCTGGCCAGCGGCCAGC
TGCAACACAAGCTGCAGTGGAAAACGCCCGAGGGGGCCAAGTACCTGTTC
AAACGGTGCCGCTACGGAACCGTGGAGGCGCAAAAGGATAACTACCGCCT
CTTTACCATTGCCAATCCGCTGGGCAAGGTGGGAAAGCAGCGTGGCTTCC
TGCAGCACTGGGACTGTGCCAGCGGGCAACTGCGTCAGGCTGTGGCCATT
GACGAAAGCCTCTCGTCACTGGCAGTGCGGGATGATGGTCGATTCGTGGC
CGTCGGCACGATGTTCTCAGGCAGCGTATCCATGTACATTGCATTCAGTC
TGCAGCGCGTGCTCCACATTCCCCATGCACACTCCATGTTCGTAACTGGC
CTCCAGTTCCTGCCTATTACCAACGAGGAGGGACCGCCCATTTCCAGCGA
CACGGAGGCAGCCGTTCTGTCCATTTCGGTGGACAACAAAGTCTGCATCC
ACAGTCTGTCCCAAAGACGTACAATCCCCGCCTGGATTGCCATCGTCTTT
CTGATTGTCATGATTTTCGCCGTGTTCGTGCTGTGCTCCTACATTGGCAT
CTGAAAGCTTTCTAGACCATTCGTTTGGCGCGCGAAGAGGG
BS22383.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:48:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9175-RB | 1338 | CG9175-PB | 1..1338 | 17..1354 | 6690 | 100 | Plus |
| CG9175-RA | 1338 | CG9175-PA | 1..1338 | 17..1354 | 6690 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:48:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9175-RB | 1983 | CG9175-RB | 176..1513 | 17..1354 | 6690 | 100 | Plus |
| CG9175-RA | 2078 | CG9175-RA | 271..1608 | 17..1354 | 6690 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:48:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6097544..6098491 | 1105..158 | 4740 | 100 | Minus |
| 2L | 23513712 | 2L | 6097308..6097478 | 1271..1101 | 855 | 100 | Minus |
| 2L | 23513712 | 2L | 6098555..6098696 | 158..17 | 710 | 100 | Minus |
| 2L | 23513712 | 2L | 6097168..6097253 | 1354..1269 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:48:53 has no hits.
BS22383.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:05 Download gff for
BS22383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9175-RB | 174..1515 | 17..1359 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:45:13 Download gff for
BS22383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9175-RA | 271..1612 | 17..1359 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:04:17 Download gff for
BS22383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9175-RA | 271..1612 | 17..1359 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:04:17 Download gff for
BS22383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6097164..6097253 | 1269..1359 | 97 | <- | Minus |
| 2L | 6097311..6097473 | 1106..1268 | 100 | <- | Minus |
| 2L | 6097544..6098491 | 158..1105 | 100 | <- | Minus |
| 2L | 6098556..6098696 | 17..157 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:45:13 Download gff for
BS22383.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6097164..6097253 | 1269..1359 | 97 | <- | Minus |
| arm_2L | 6097311..6097473 | 1106..1268 | 100 | <- | Minus |
| arm_2L | 6097544..6098491 | 158..1105 | 100 | <- | Minus |
| arm_2L | 6098556..6098696 | 17..157 | 100 | | Minus |
BS22383.pep Sequence
Translation from 16 to 1353
> BS22383.pep
MAHTRRPSDGLLARVNFPLYAVDMLTSRHILVAGGGGSSKTGVANGFEIY
ELYHNGSHFCAEEVLRHETGANVVMNFAVRNGGRRGYLCAGQEAHCQMYY
VQPRVQSEEDGNGNGVGVGDGKPAPEERPHENGNVRQRNAHSGVEPVANG
HRPPLSTADILRQFRRLHFDIQAADVIQTDFLKGAEPLQRVVRISGNGRL
MATGGTDGKLRVWTFPQMTLAAELAAHSKEIDDLDFSPDSKLIASISKDA
QGLVWDLASGQLQHKLQWKTPEGAKYLFKRCRYGTVEAQKDNYRLFTIAN
PLGKVGKQRGFLQHWDCASGQLRQAVAIDESLSSLAVRDDGRFVAVGTMF
SGSVSMYIAFSLQRVLHIPHAHSMFVTGLQFLPITNEEGPPISSDTEAAV
LSISVDNKVCIHSLSQRRTIPAWIAIVFLIVMIFAVFVLCSYIGI*
BS22383.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:52:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9175-PB | 445 | CG9175-PB | 1..445 | 1..445 | 2326 | 100 | Plus |
| CG9175-PA | 445 | CG9175-PA | 1..445 | 1..445 | 2326 | 100 | Plus |
