BS22386.complete Sequence
3422 bp assembled on 2011-02-16
GenBank Submission: KX802079
> BS22386.complete
GAAGTTATCAGTCGACATGGAAATTGAAACAGATCAGTCTATTGAAGCGA
TGGACACCCAGGACACCCAAGAGGTCGAGATCCTCACCAGTGACCTACAA
CAGACACAGCAGCAGCGAAATTCACCGCCTCAATTGCCGAAATTCAAGAA
TCTTATCCAGCCACAATTGCATGCCGTTGGTGCAGTGACCCAGTTGCCCA
GCGAGAACGGCAATATGCCGCCACAACAACTATTGGCCGATAGCAGCTCC
ACTTCATTCGGCGATGGCGAGGCCATGGGCATTGACGATGAGTCCAAGGA
GGATCAGTTCCGTTCGGAGACGACATTCTCCTTTACCGTCGAGAATGTGG
TACAATTGAAATCGCAGAGACTATCGCCGCCAGTTTATGTCCGCATGCTG
CCATGGCGGATCATGGTCATACCCAATGATCGAGCGCTCGGCTTCTTTCT
GCAGTGCAACGGGGAGAATGATTCGCCCACCTGGTCGTGCAATGCCATTG
CCGAGCTGCGTTTGAAGTGCCACAAGCCGGATGCACAGCCATTCACACGT
GCCCGGATTAAGCATTTGTTCTACTCCAAGGAGAATGACTATGGCTACTC
GAATTTTATCACCTGGCAGGAGCTGAAGGATTCCGAAAAGAGCTATGTGC
ACAATAATAGCATTACCCTGGAGGTTCACGTCGTTGCGGATGCACCGCAT
GGCGTTCTGTGGGACTCCAAGAAGCACACAGGCTATGTTGGCCTTAAAAA
TCAGGGCGCCACTTGCTATATGAACTCGCTGCTGCAGACATTGTACTTCA
CCAATTCGCTAAGACTGTCTGTGTATCGCATACCCACGGAGGCTGACGAT
AGTTCCAAATCCGTTGGATTATCGCTGCAGCGTGTGTTCCATGAATTGCA
GTTTGGTGACCGTCCCGTTGGCACCAAAAAGTTAACCAAATCCTTTGGCT
GGGAGACGCTCGATTCGTTTATGCAGCACGATGTCCAGGAGTTTCTGCGC
GTGCTGCTCGACAAGCTCGAGTCGAAGATGAAGGGCACCATCCTGGAGGG
CACCATACCGGGTCTGTTTGAGGGCAAAATGTCGTCGTACATTAAGTGCA
AGAACGTCGATTACAATAGCACACGCTACGAGACGTTCTACGACATTCAG
CTGAACATCAAGGATAAGAAGAACATCTACGAATCCTTTCAGGATTACGT
AGCCCCCGAAACGCTGGAGGGTGACAACAAATACGATGCTGGTGTGCATG
GCTTGCAGGAAGCCAGCAAGGGCGTCATCTTCACTTCATTCCCACCCGTT
TTGCATCTGCACCTGATGCGCTTCCAGTACGATCCCGTCACGGATAGCTC
GATCAAGTACAACGATCGTTTCGAGTTCTACGAACACATCAATCTGGATC
GCTATCTGGCCGAGAGTGAGAATACCTTGGCGGACTACGTTCTACACGCC
GTGCTGGTGCATTCGGGCGATAACCATGGCGGGCACTATGTGGTCTTCAT
TAATCCAAAGGCTGACGGACGTTGGTTTAAGTTCGACGACGATGTGGTCT
CCAGTTGCCGCAAACAGGAGGCGATCGAACAGAACTACGGCGGCATGGAC
GATGAGATCTCGTTTCATGCCAAGTGCAGCAATGCCTATATGCTGGTCTA
CATCCGACAGTCGGAGTTGGATCGCGTCCTTGGCGACATAACGGAAAGCG
AGATATCAAGCGATCTGGTGGAGCGGCTCGATCTGGAGAAACGAATCGAA
ATGGCGCGACGCAAAGAGCGCGGCGAGGCCAACACATATGTGTCCGTGCA
CGTAATCCTCGAGGAGAACTTCGAGGAACAGCACAAGCGTCGTCTCTTCG
ATCTGGAGAAGGTCCATCCGCGCGTCTTCCGCATCAAACAAAATCAGACT
GTCGACGAGCTGGTGGACTTGTTTGTCAGGGGTTTCGGAGTGTCGCGCCA
ACGTATGCGCATGTGGAACTTGTGCACCGCCCAGACGCAAAAGTTTTCGC
ATTTCGATTTCGTGGCGGAGGGATCACGCACCATCGAGCAGATATCAACG
TCACAGAAACCGTGGGTCATCTGGCTGCAGCTGGCCTGGACGGATGTACC
TGGTCCCCTGCCGCCCTTTAATCCCAAGACCGAATCCCTGCTGTTCCTCA
AATACTATGATCCGCGCAATAAGCGGCTAAATTATATTGGATGTACCCAA
CAGCCGCACACCCGCCGACTCATTGATCTGGTGCCGGATGTTAATAGCAA
ACTGGGCTTCGAACCGGACACCGAGCTGACCATCTACGATGAGTATGCCG
ACAAGAAGCTGGTCAATCTGAATGAGCCCATCGAGAGTGCGCTGTTCATA
CCGCAGGATCATCTGCAAGGCCACATTTTAATCTTCGAGCGCGAAAACGT
TGACGCCAAACTCGACCTGCCCACGGTAGGGGATTACTTCCTGGATCTAG
TCTACCGCATCGAGATCATCTTCAGCGACAAATGCAATCCCAATGAACCG
GACTTTACGCTGGAGCTGTCCAATCGCTATAATTACGATCAGCTCGCCAA
TGCGGTGGCCGAGCGCTTGAATACCGATCCACAGAAGCTGCAGTTCTTCA
TGTGCATCAACAACTACAAGGAGACGGCGGGCAATGCTGTACCCTACACA
TTTAAGGGCACCATCAAGGATCTGGTTTCTTACACCAAACAGAGCTCAAC
CAAGCGTATCTTCTATCAACGACTATCGCTTAGCATCCACGAGCTGGATA
ATAAGAAGCAGTTCAAGTGCGTCTGGGTGAGCAGTGATCTTAAGGACGAA
AAGGAGCTGGTACTTTACCCCAATAAGAACGATACGGTGAAAGGATTGCT
GGAGGAGGCGGCAAAGAAAATCTCGTTTGCGGAGAACAGCCGTCGCAAAT
TGCGCCTGTTGAAGATTAGCAATCATAAGATTGTGGCGGTATGCAAGGAC
GATATACCGCTGGATACGCTGCTAAAGTCCAACGAGTCAATAACGACCGC
ACAGGGCGCTCAAAAGACTTTTCGCATCGAGGAGGTGCCGGCGGAGGATA
TGCAACTGGCGGAGAATGAGTTCCTCATACCAGTGGCCCATTTCAGCAAA
GAGCTGTACAACTCATTCGGCATACCCTTCCTAACCAAGGCGCGCCAAGG
TGAGCCATACGGTGCACTTAAGCAGCGCATCCAGCGTCGTCTGAATGTGC
AGGACAAGGAGTGGGAAAACTACAAATTCTGCGTAATCTCTATGGGTCAC
AATGCGGATGTTAATGACAATACGCCCGTTGATCTGGAGGTTTATCGCTC
GTGGACCAGCGGCCAGTTGCCCTTCTTTGGCTTGGATCACATCAACAAGT
CGCGTAAGCGCAGTTCGCTTAACTTCTCCGAGAAGGCCATCAAGATATAT
AACTAGAAGCTTTCTAGACCAT
BS22386.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 07:04:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Usp7-RB | 3390 | CG1490-PB | 1..3390 | 17..3406 | 16950 | 100 | Plus |
| Usp7-RC | 3378 | CG1490-PC | 1..3378 | 17..3406 | 16735 | 99.6 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 07:04:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Usp7-RB | 5642 | CG1490-RB | 782..4171 | 17..3406 | 16950 | 100 | Plus |
| Usp7-RC | 4880 | CG1490-RC | 782..4159 | 17..3406 | 16735 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 07:04:40
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 12025113..12026513 | 2657..1257 | 7005 | 100 | Minus |
| X | 23542271 | X | 12026625..12027867 | 1259..17 | 6215 | 100 | Minus |
| X | 23542271 | X | 12024308..12025064 | 3406..2650 | 3770 | 99.9 | Minus |
Blast to na_te.dros performed 2014-11-27 07:04:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Stalker4 | 7359 | Stalker4 STALKER4 7359bp | 2529..2607 | 50..129 | 118 | 62.5 | Plus |
| Stalker | 7256 | Stalker STALKER 7256bp | 2423..2501 | 50..129 | 118 | 62.5 | Plus |
BS22386.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:17:56 Download gff for
BS22386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp7-RB | 778..4167 | 17..3406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 05:04:23 Download gff for
BS22386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp7-RB | 782..4171 | 17..3406 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:02:23 Download gff for
BS22386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Usp7-RB | 782..4171 | 17..3406 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 08:02:23 Download gff for
BS22386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 12024308..12025057 | 2657..3406 | 100 | <- | Minus |
| X | 12025114..12026511 | 1259..2656 | 100 | <- | Minus |
| X | 12026626..12027867 | 17..1258 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 05:04:23 Download gff for
BS22386.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 11918341..11919090 | 2657..3406 | 100 | <- | Minus |
| arm_X | 11919147..11920544 | 1259..2656 | 100 | <- | Minus |
| arm_X | 11920659..11921900 | 17..1258 | 100 | | Minus |
BS22386.pep Sequence
Translation from 16 to 3405
> BS22386.pep
MEIETDQSIEAMDTQDTQEVEILTSDLQQTQQQRNSPPQLPKFKNLIQPQ
LHAVGAVTQLPSENGNMPPQQLLADSSSTSFGDGEAMGIDDESKEDQFRS
ETTFSFTVENVVQLKSQRLSPPVYVRMLPWRIMVIPNDRALGFFLQCNGE
NDSPTWSCNAIAELRLKCHKPDAQPFTRARIKHLFYSKENDYGYSNFITW
QELKDSEKSYVHNNSITLEVHVVADAPHGVLWDSKKHTGYVGLKNQGATC
YMNSLLQTLYFTNSLRLSVYRIPTEADDSSKSVGLSLQRVFHELQFGDRP
VGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLESKMKGTILEGTIPGL
FEGKMSSYIKCKNVDYNSTRYETFYDIQLNIKDKKNIYESFQDYVAPETL
EGDNKYDAGVHGLQEASKGVIFTSFPPVLHLHLMRFQYDPVTDSSIKYND
RFEFYEHINLDRYLAESENTLADYVLHAVLVHSGDNHGGHYVVFINPKAD
GRWFKFDDDVVSSCRKQEAIEQNYGGMDDEISFHAKCSNAYMLVYIRQSE
LDRVLGDITESEISSDLVERLDLEKRIEMARRKERGEANTYVSVHVILEE
NFEEQHKRRLFDLEKVHPRVFRIKQNQTVDELVDLFVRGFGVSRQRMRMW
NLCTAQTQKFSHFDFVAEGSRTIEQISTSQKPWVIWLQLAWTDVPGPLPP
FNPKTESLLFLKYYDPRNKRLNYIGCTQQPHTRRLIDLVPDVNSKLGFEP
DTELTIYDEYADKKLVNLNEPIESALFIPQDHLQGHILIFERENVDAKLD
LPTVGDYFLDLVYRIEIIFSDKCNPNEPDFTLELSNRYNYDQLANAVAER
LNTDPQKLQFFMCINNYKETAGNAVPYTFKGTIKDLVSYTKQSSTKRIFY
QRLSLSIHELDNKKQFKCVWVSSDLKDEKELVLYPNKNDTVKGLLEEAAK
KISFAENSRRKLRLLKISNHKIVAVCKDDIPLDTLLKSNESITTAQGAQK
TFRIEEVPAEDMQLAENEFLIPVAHFSKELYNSFGIPFLTKARQGEPYGA
LKQRIQRRLNVQDKEWENYKFCVISMGHNADVNDNTPVDLEVYRSWTSGQ
LPFFGLDHINKSRKRSSLNFSEKAIKIYN*
BS22386.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:13:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Usp7-PB | 1129 | CG1490-PB | 1..1129 | 1..1129 | 5937 | 100 | Plus |
| Usp7-PC | 1125 | CG1490-PC | 1..1125 | 1..1129 | 5902 | 99.6 | Plus |
| Ubp64E-PD | 1538 | CG5486-PD | 332..615 | 185..470 | 461 | 37.8 | Plus |
| Ubp64E-PB | 1556 | CG5486-PB | 350..633 | 185..470 | 461 | 37.8 | Plus |
| Ubp64E-PA | 1556 | CG5486-PA | 350..633 | 185..470 | 461 | 37.8 | Plus |
