BS22387.complete Sequence
2018 bp assembled on 2011-02-17
GenBank Submission: KX802868
> BS22387.complete
GAAGTTATCAGTCGACATGGAGATCCTGCTGGAACTAAACCTAAAGCAGA
AGCTGGCCACCCGACTAGGCACCATCCTGCTGGCCACAGTGATCTTCGGC
GCCTTTTGCTGGGACAACGCGTTGGCCAGTCTAACACTGGGAGCAGTGGT
GGCTCTCCTGCTCAGAAATCCCACCTTCGTCTTTGCCTTGGTAATGACCG
CGTCCAGGGACCTAAAGGCTTTCCAGCGATTCGTGGCCCTCAACATCTAC
CTGCTAAGAAAGGATCGCGGCGGATTCACTGTGGCCCGCTGTTTCCAGGA
CCAGGCCAGACGCCGCCCCAAAAAGACATGCTTCGTGATGGACGATCGCC
ATTTAAGCTTTGCAGAGGCTCTGGAGTTTAGCCAAAAGATAGCTGGATAT
TTTAGCGATCGCGGCCTGGAGAGGGGCGACTGTGTGGCCCTACTAATGGA
AACGCGTCTGGAGTATCCCTGCATTTGGTTGGGTCTCTCCCAGCTCGGGG
TAATCACAGCCCTTATTAACTCCAATCTGCGCGGGGAGTCTCTGCTGCAC
TCCATCAAAGTGGCCAATGCCAAGGCCCTAATTGTGGGCAGTGAACTCCT
GGATGTGCTGGTATCACTTAGGGAGAAGGAGCAGTTGGACGAGGTGCCCA
TCTATCAGTACACAGATGACGAGGTTCGCGGGGTGGCTGGACATGATCTT
TTGCCAGGAGCTGTGGACTTGGTTACTGCTCTAAAGACCCAAAAGAAACT
GGAGCTACCGAGTGCTGTCTGTCCTGGAGAAGCTCGTTCCAAATTGCTCT
ACGTTTACACCTCTGGAACTACGGGCTTGCCCAAAGCAGCTGTGATCACC
AACCTGCGGTTCCTCTTCATGTCTGCAGGATCCTACTACATGCTCAAGAT
GTCCAGCGACGATGTGGTGTACGATCCCCTTCCCCTCTACCACACCGCTG
GTGGAATTGTGGGAGTGGGCAATGCCATCCTCAATGGATCCACGGTGGTG
CTGCGCAAAAAGTTCTCGGCCAGGAACTTCTGGCTTGACTGCGATCGCCA
CAACTGCACTGTGGCCCAGTATATCGGGGAGCTGTGTCGCTATCTTCTGG
CCACCTCCTACTCCCCCGATCAGCAGAAGCACAACCTGCGTCTGATGTAC
GGAAATGGACTGAGGCCACAGATCTGGTCGCAGTTCGTCCGTCGCTTCGG
TATTCCGCACATAGGAGAAATTTACGGCGCCACCGAGGGAAACTCCAACC
TGATCAACATCACCAACCGAGTGGGGGCCATCGGATTTGTTCCCGTCTAC
GGATCGAGCCTCTACCCTGTTCAAGTCCTGCGGTGCGACGAGTACACGGG
TGAGCTGCTCAAGGACTCCAAGGGTCACTGCATCAGGTGTCAGCCTGGGC
AAGCGGGTCTCCTGGTGGGCAAGGTGGACGCTCGGCGGGCCGTGAGTGCC
TTCCATGGATACGCCGATAAGGGAGCCTCGGAGCAGAAGCTCCTTCGAAA
TGTCTTCACATCCGGAGACGTCTTCTTTAACTCGGGCGACATGGTGGTGC
GAGACATACTCGGTTACTTTTACTTCAAGGATCGCACGGGAGACACCTTC
CGCTGGCGGGGTGAAAACGTCGCCACCCAGGAAGTGGAGGCCATTATCAC
GAACTGTGTTGGCTTGGAGGACTGCGTGGTCTATGGCGTGCAGATCCCCC
ATGTGGAGGGCAAGGCGGGAATGGCGGCGATTGTGGATCCGGAGCGCAAG
GTGGACATGGATTACCTGTCCGTGGTGCTGCGGGGCAGTTTGCCTCCGTA
CGCTCGCCCCCTGTTCATCCGACTGCTGGACGAGATTCCGCGCACCGCCA
CCTTCAAGCTGAAGAAACGGGAGTTGGCCAAAGAGGCGTATGACATCGGC
CAGCTCTCAGATCCCATATACTACCTGAATCGGGACGGTATCTACAGACC
ACTCAGTCAGGAGCAGCACGAGTTGCTGCGATCGGGAAAGGCGGGACTCT
GAAAGCTTTCTAGACCAT
BS22387.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:01:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3394-RB | 1986 | CG3394-PB | 1..1986 | 17..2002 | 9930 | 100 | Plus |
| CG3394-RA | 2064 | CG3394-PA | 79..2064 | 17..2002 | 9930 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:01:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3394-RB | 2357 | CG3394-RB | 252..2237 | 17..2002 | 9930 | 100 | Plus |
| CG3394-RA | 2308 | CG3394-RA | 203..2188 | 17..2002 | 9930 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:01:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 24295908..24297384 | 217..1693 | 7385 | 100 | Plus |
| 2R | 25286936 | 2R | 24297678..24297991 | 1689..2002 | 1570 | 100 | Plus |
| 2R | 25286936 | 2R | 24295650..24295850 | 17..217 | 1005 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:01:43 has no hits.
BS22387.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-17 16:37:44 Download gff for
BS22387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3394-RB | 133..2117 | 17..2001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:07:24 Download gff for
BS22387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3394-RA | 203..2187 | 17..2001 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:09:35 Download gff for
BS22387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3394-RA | 203..2187 | 17..2001 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:09:35 Download gff for
BS22387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 24295650..24295849 | 17..216 | 100 | -> | Plus |
| 2R | 24295908..24297384 | 217..1693 | 100 | -> | Plus |
| 2R | 24297683..24297990 | 1694..2001 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:07:24 Download gff for
BS22387.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 20183173..20183372 | 17..216 | 100 | -> | Plus |
| arm_2R | 20183431..20184907 | 217..1693 | 100 | -> | Plus |
| arm_2R | 20185206..20185513 | 1694..2001 | 100 | | Plus |
BS22387.pep Sequence
Translation from 16 to 2001
> BS22387.pep
MEILLELNLKQKLATRLGTILLATVIFGAFCWDNALASLTLGAVVALLLR
NPTFVFALVMTASRDLKAFQRFVALNIYLLRKDRGGFTVARCFQDQARRR
PKKTCFVMDDRHLSFAEALEFSQKIAGYFSDRGLERGDCVALLMETRLEY
PCIWLGLSQLGVITALINSNLRGESLLHSIKVANAKALIVGSELLDVLVS
LREKEQLDEVPIYQYTDDEVRGVAGHDLLPGAVDLVTALKTQKKLELPSA
VCPGEARSKLLYVYTSGTTGLPKAAVITNLRFLFMSAGSYYMLKMSSDDV
VYDPLPLYHTAGGIVGVGNAILNGSTVVLRKKFSARNFWLDCDRHNCTVA
QYIGELCRYLLATSYSPDQQKHNLRLMYGNGLRPQIWSQFVRRFGIPHIG
EIYGATEGNSNLINITNRVGAIGFVPVYGSSLYPVQVLRCDEYTGELLKD
SKGHCIRCQPGQAGLLVGKVDARRAVSAFHGYADKGASEQKLLRNVFTSG
DVFFNSGDMVVRDILGYFYFKDRTGDTFRWRGENVATQEVEAIITNCVGL
EDCVVYGVQIPHVEGKAGMAAIVDPERKVDMDYLSVVLRGSLPPYARPLF
IRLLDEIPRTATFKLKKRELAKEAYDIGQLSDPIYYLNRDGIYRPLSQEQ
HELLRSGKAGL*
BS22387.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:25:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3394-PB | 661 | CG3394-PB | 1..661 | 1..661 | 3413 | 100 | Plus |
| CG3394-PA | 687 | CG3394-PA | 27..687 | 1..661 | 3413 | 100 | Plus |
| Fatp-PE | 626 | CG7400-PE | 8..617 | 41..652 | 1438 | 47.4 | Plus |
| Fatp-PB | 626 | CG7400-PB | 8..617 | 41..652 | 1438 | 47.4 | Plus |
| Fatp-PA | 626 | CG7400-PA | 8..617 | 41..652 | 1438 | 47.4 | Plus |
