BS22405.complete Sequence
914 bp assembled on 2011-01-27
GenBank Submission: KX801365
> BS22405.complete
GAAGTTATCAGTCGACATGCTAGCCTGCAAGCTTCTTCTCGCGTTGGTCA
TGGGAATGCACTGCATTCAATTGTTGATGGCGGCCTGCGTGTGCTCCGAA
AAGGGAACGGACTACTGCCAAAGCTGTCAGGGATCCACGGTCATCCGGCC
GAAGCCCCGATACTACGAGCCCAGTGACGTTAACCTGCCGCCGATCGGAG
ACAACTGCTGGTGCAGCAAGCAGCTGATCGAACCCGCCCAACTGCCCAAG
ACCTGCGGAAAAACCACGCCATGCAAGCCCACCTGTTCGTGCCAGCAGAT
CAGCTCCGACAGCAGCTACGCCTCCTCTTCCAGCTCAGGATCCGTGTACG
GAAAAATCGACTATGCCGCAGAGAAGATAGTGGACAACAGTCCAGCTGCG
GATCCCATCAGCGTGAGTCTGGCCGCCCAGGCTGGAAAGGCCATCAATGT
GCCGGAGGCCAAGTTGGCCTACGGATTTGCCCAGAAGCCCGTCGATGGTG
AGAAAAAGGTGGTGTTCTCCAACGTGCCCGAGGAGAATCTCTTCAAGCTG
AAGAGCGACGTGATCACGCTGAAGAAGCGCACCTATGCGACCAAGCAGGA
GGATGAGGAGGAGTACGCCGAGGAGGAGCAGGAGCAGGAACAGTCCTCCG
ATGATGAGGAGGCACCGCAACTCACCTACAAACAGCTGGGCTACATCACC
GAGCAATACAAGAACCCCAAGTTCAGGAAGATCAGCAGTTCCAGCTCCAG
TTATGCGTACAAGGACTACAAGGATTCCAGCGAGAGCGGCTACGGTAAAG
TGGCCGGCAAGGTGTCCGTGGACTGTGGCTTCAAGCCCGGCCGGATCACC
TCGTACCGGAAGTCAAAACGAGAGGAGTCCGACGACGGTTACTACTGAAA
GCTTTCTAGACCAT
BS22405.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp7Fa-RA | 882 | CG33962-PA | 1..882 | 17..898 | 4410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp7Fa-RA | 1033 | CG33962-RA | 31..915 | 15..899 | 4425 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 8472425..8472969 | 355..899 | 2725 | 100 | Plus |
X | 23542271 | X | 8471382..8471571 | 73..262 | 950 | 100 | Plus |
X | 23542271 | X | 8472264..8472355 | 263..354 | 460 | 100 | Plus |
X | 23542271 | X | 8470918..8470976 | 15..73 | 295 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:52:14 has no hits.
BS22405.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:11 Download gff for
BS22405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp7Fa-RA | 33..913 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:32 Download gff for
BS22405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp7Fa-RA | 33..913 | 17..897 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:30 Download gff for
BS22405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Cp7Fa-RA | 33..913 | 17..897 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:30 Download gff for
BS22405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 8470920..8470976 | 17..73 | 100 | -> | Plus |
X | 8471383..8471571 | 74..262 | 100 | -> | Plus |
X | 8472264..8472355 | 263..354 | 100 | -> | Plus |
X | 8472425..8472967 | 355..897 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:32 Download gff for
BS22405.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 8365416..8365604 | 74..262 | 100 | -> | Plus |
arm_X | 8366297..8366388 | 263..354 | 100 | -> | Plus |
arm_X | 8364953..8365009 | 17..73 | 100 | -> | Plus |
arm_X | 8366458..8367000 | 355..897 | 100 | | Plus |
BS22405.pep Sequence
Translation from 16 to 897
> BS22405.pep
MLACKLLLALVMGMHCIQLLMAACVCSEKGTDYCQSCQGSTVIRPKPRYY
EPSDVNLPPIGDNCWCSKQLIEPAQLPKTCGKTTPCKPTCSCQQISSDSS
YASSSSSGSVYGKIDYAAEKIVDNSPAADPISVSLAAQAGKAINVPEAKL
AYGFAQKPVDGEKKVVFSNVPEENLFKLKSDVITLKKRTYATKQEDEEEY
AEEEQEQEQSSDDEEAPQLTYKQLGYITEQYKNPKFRKISSSSSSYAYKD
YKDSSESGYGKVAGKVSVDCGFKPGRITSYRKSKREESDDGYY*
BS22405.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:11
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Cp7Fa-PA | 293 | CG33962-PA | 1..293 | 1..293 | 1540 | 100 | Plus |