Clone BS22405 Report

Search the DGRC for BS22405

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:224
Well:5
Vector:pDNR-Dual
Associated Gene/TranscriptCp7Fa-RA
Protein status:BS22405.pep: full length peptide match
Sequenced Size:914

Clone Sequence Records

BS22405.complete Sequence

914 bp assembled on 2011-01-27

GenBank Submission: KX801365

> BS22405.complete
GAAGTTATCAGTCGACATGCTAGCCTGCAAGCTTCTTCTCGCGTTGGTCA
TGGGAATGCACTGCATTCAATTGTTGATGGCGGCCTGCGTGTGCTCCGAA
AAGGGAACGGACTACTGCCAAAGCTGTCAGGGATCCACGGTCATCCGGCC
GAAGCCCCGATACTACGAGCCCAGTGACGTTAACCTGCCGCCGATCGGAG
ACAACTGCTGGTGCAGCAAGCAGCTGATCGAACCCGCCCAACTGCCCAAG
ACCTGCGGAAAAACCACGCCATGCAAGCCCACCTGTTCGTGCCAGCAGAT
CAGCTCCGACAGCAGCTACGCCTCCTCTTCCAGCTCAGGATCCGTGTACG
GAAAAATCGACTATGCCGCAGAGAAGATAGTGGACAACAGTCCAGCTGCG
GATCCCATCAGCGTGAGTCTGGCCGCCCAGGCTGGAAAGGCCATCAATGT
GCCGGAGGCCAAGTTGGCCTACGGATTTGCCCAGAAGCCCGTCGATGGTG
AGAAAAAGGTGGTGTTCTCCAACGTGCCCGAGGAGAATCTCTTCAAGCTG
AAGAGCGACGTGATCACGCTGAAGAAGCGCACCTATGCGACCAAGCAGGA
GGATGAGGAGGAGTACGCCGAGGAGGAGCAGGAGCAGGAACAGTCCTCCG
ATGATGAGGAGGCACCGCAACTCACCTACAAACAGCTGGGCTACATCACC
GAGCAATACAAGAACCCCAAGTTCAGGAAGATCAGCAGTTCCAGCTCCAG
TTATGCGTACAAGGACTACAAGGATTCCAGCGAGAGCGGCTACGGTAAAG
TGGCCGGCAAGGTGTCCGTGGACTGTGGCTTCAAGCCCGGCCGGATCACC
TCGTACCGGAAGTCAAAACGAGAGGAGTCCGACGACGGTTACTACTGAAA
GCTTTCTAGACCAT

BS22405.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:52:15
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fa-RA 882 CG33962-PA 1..882 17..898 4410 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:52:16
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fa-RA 1033 CG33962-RA 31..915 15..899 4425 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:52:13
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 8472425..8472969 355..899 2725 100 Plus
X 23542271 X 8471382..8471571 73..262 950 100 Plus
X 23542271 X 8472264..8472355 263..354 460 100 Plus
X 23542271 X 8470918..8470976 15..73 295 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:52:14 has no hits.

BS22405.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:11 Download gff for BS22405.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fa-RA 33..913 17..897 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:46:32 Download gff for BS22405.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fa-RA 33..913 17..897 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:05:30 Download gff for BS22405.complete
Subject Subject Range Query Range Percent Splice Strand
Cp7Fa-RA 33..913 17..897 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:05:30 Download gff for BS22405.complete
Subject Subject Range Query Range Percent Splice Strand
X 8470920..8470976 17..73 100 -> Plus
X 8471383..8471571 74..262 100 -> Plus
X 8472264..8472355 263..354 100 -> Plus
X 8472425..8472967 355..897 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:46:32 Download gff for BS22405.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 8365416..8365604 74..262 100 -> Plus
arm_X 8366297..8366388 263..354 100 -> Plus
arm_X 8364953..8365009 17..73 100 -> Plus
arm_X 8366458..8367000 355..897 100   Plus

BS22405.pep Sequence

Translation from 16 to 897

> BS22405.pep
MLACKLLLALVMGMHCIQLLMAACVCSEKGTDYCQSCQGSTVIRPKPRYY
EPSDVNLPPIGDNCWCSKQLIEPAQLPKTCGKTTPCKPTCSCQQISSDSS
YASSSSSGSVYGKIDYAAEKIVDNSPAADPISVSLAAQAGKAINVPEAKL
AYGFAQKPVDGEKKVVFSNVPEENLFKLKSDVITLKKRTYATKQEDEEEY
AEEEQEQEQSSDDEEAPQLTYKQLGYITEQYKNPKFRKISSSSSSYAYKD
YKDSSESGYGKVAGKVSVDCGFKPGRITSYRKSKREESDDGYY*

BS22405.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:11
Subject Length Description Subject Range Query Range Score Percent Strand
Cp7Fa-PA 293 CG33962-PA 1..293 1..293 1540 100 Plus