BS22441.complete Sequence
581 bp assembled on 2011-01-27
GenBank Submission: KX801478
> BS22441.complete
GAAGTTATCAGTCGACATGCATTTAAATAAATATAGTGAAGTAGTGGAGC
GGCTTGAGAACGAGGAATTTGAGCAAGTCGAACTGGGAGCTGAAGTCTAC
CAGCAATTACTTGCTATTTACCTCTATCAAAACAAACTGGCTGATGCCAA
GTTGTTGTGGATGAGAGTTCCAGCTAACCTAAGGGATGACAAGGAACTGA
TCCAGCTGAACCTGCTCAATATTGCCCTGCAGAACAATAACTATGCCGAT
TTCTTCAAACACATCAAGTATGAGTGGTCGGAAAGAGTAAAGTCACCTGT
GGAGGATCTTCTAAATAAGCAACGCGAAGAGCTGTTCAAACTAATGGGCA
GCGCATATATGTCCATTTACCAGCACAATCTACTGGAATTGTCACTAATG
TCGGAGGACGAACTGAAACACGCCTGTGCGGCCTTAAATTGGACTGAGGA
ACTGGACGGTGACCGGGTAATCCTGAAGCCCAAGGTTCAGGAAGCACCGC
CAGCTCGTGGAAACGATGACCAGTTGCTTAAGTTGACCGAGTTTGTAACC
TTCCTAGAGAATTAAAAGCTTTCTAGACCAT
BS22441.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:54:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-RB | 549 | CG42522-PB | 1..549 | 17..565 | 2745 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:54:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-RB | 641 | CG13383-RB | 69..617 | 17..565 | 2745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:54:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8365389..8365639 | 315..565 | 1255 | 100 | Plus |
2L | 23513712 | 2L | 8365153..8365328 | 139..314 | 880 | 100 | Plus |
2L | 23513712 | 2L | 8365038..8365105 | 72..139 | 340 | 100 | Plus |
2L | 23513712 | 2L | 8364923..8364979 | 17..73 | 285 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:54:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
F-element | 4708 | F-element F 4708bp | 2581..2611 | 116..146 | 119 | 87.1 | Plus |
BS22441.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:13 Download gff for
BS22441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 92..638 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:27 Download gff for
BS22441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 69..615 | 17..563 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:24 Download gff for
BS22441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CSN8-RB | 69..615 | 17..563 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:24 Download gff for
BS22441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8364923..8364979 | 17..73 | 100 | -> | Plus |
2L | 8365040..8365104 | 74..138 | 100 | -> | Plus |
2L | 8365153..8365328 | 139..314 | 100 | -> | Plus |
2L | 8365389..8365637 | 315..563 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:27 Download gff for
BS22441.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8365153..8365328 | 139..314 | 100 | -> | Plus |
arm_2L | 8365389..8365637 | 315..563 | 100 | | Plus |
arm_2L | 8364923..8364979 | 17..73 | 100 | -> | Plus |
arm_2L | 8365040..8365104 | 74..138 | 100 | -> | Plus |
BS22441.pep Sequence
Translation from 16 to 564
> BS22441.pep
MHLNKYSEVVERLENEEFEQVELGAEVYQQLLAIYLYQNKLADAKLLWMR
VPANLRDDKELIQLNLLNIALQNNNYADFFKHIKYEWSERVKSPVEDLLN
KQREELFKLMGSAYMSIYQHNLLELSLMSEDELKHACAALNWTEELDGDR
VILKPKVQEAPPARGNDDQLLKLTEFVTFLEN*
BS22441.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CSN8-PB | 182 | CG13383-PB | 1..182 | 1..182 | 937 | 100 | Plus |