Clone BS22465 Report

Search the DGRC for BS22465

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:224
Well:65
Vector:pDNR-Dual
Associated Gene/Transcriptl(1)G0255-RA
Protein status:BS22465.pep: full length peptide match
Sequenced Size:1520

Clone Sequence Records

BS22465.complete Sequence

1520 bp assembled on 2011-01-27

GenBank Submission: KX802614

> BS22465.complete
GAAGTTATCAGTCGACATGGTGCTACCATTATTGCAACGCTCCACGCTTC
GCGGCGTTCAACAAATGACGAAACCCTGGGCCGCCATTGGAAGTTTGCGT
CTGGCCTCCCAGGAGTTTCGCGTGGAGAGCGACACCTTTGGCGAACTGAA
GGTGCCCGCGGATAAGTACTATGGCGCCCAAACGATGCGATCCCAGATCA
ATTTCCCCATCGGCGGAGCCACCGAACGGATGCCCAAACCCGTGGTCCAG
GCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTGAACAAGGAGTTCGG
ACTGGACAGCAAGGTTAGCGAGGCGATCTCGAAGGCGGCCGACGATGTGA
TCTCTGGCAAGCTATACGACGACCACTTCCCGCTGGTCATCTGGCAGACG
GGCTCGGGCACGCAGAGCAACATGAATGTGAATGAGGTGATCAGCAATCG
TGCCATTGAGCTGCTGGGCGGCAAACTGGGCTCCAAGACGCCCGTGCATC
CCAACGATCATGTGAACAAATCGCAGAGCTCCAACGATACCTTCCCCACC
GCCATTCACATCTCGGTGGCGCTGGAGCTGAACAACAACCTTAAGCCGGC
GATTAAGACGCTGCACGATGCGCTGCGTGCCAAGTCGGAGGAGTTCAAGG
ACATTATCAAGATCGGACGCACGCATACGATGGATGCGGTGCCATTGACG
CTGGGCCAAGAGTTCAGCGGCTATGCCCAGCAATTGGCCTACGCCCAGGA
GCGCATCGATGCCTGTCTGCCGCGCGTCTATGAGCTGGCTCTGGGCGGCA
CTGCTGTGGGTACGGGTCTGAACACACGCAAGGGATTCGCCGAGAAGTGC
GCTGCAAAGATCGCCGAGCTGACCAGCCTGCCCTTCGTTACCGCGCCCAA
CAAGTTCGAGGCACTGGCTGCCCGCGATGCCATGGTGGAGGTGCATGGTG
TGCTCAACACGATCGCCGTTAGCCTGATGAAGATTGCCAACGATATTCGT
TTCCTTGGCTCCGGACCGCGTTGCGGTTTGGGTGAGCTCTCGCTACCGGA
GAACGAGCCAGGTAGCTCCATCATGCCCGGCAAGGTGAATCCCACGCAAT
GCGAGTCGCTGACAATGCTCTCCGCCCAGGTGATGGGCAATCAGGTGGCG
GTGACCATCGGTGGATCCAATGGGCACTTCGAGCTGAATGTATTCAAGCC
CCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTCTGATGGCA
GCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCGAACCGCGAG
AATATTGCCAAGATCATGAACGAGTCGCTCATGCTGGTGACCGCTCTGAA
TCCGCACATTGGTTACGACAAGGCTGCGAAAATTGCAAAGACGGCGCACA
AGAATGGCACCACACTCAAGGAGGAGGCCATCAATTTGGGTTACCTGACG
GAGCAGCAGTTCAACGACTGGGTGCGACCCGAACAGATGCTGGGACCCAA
GTGAAAGCTTTCTAGACCAT

BS22465.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:55:03
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0255-RA 1488 CG4094-PA 1..1488 17..1504 7440 100 Plus
l(1)G0255-RB 1404 CG4094-PB 2..1404 102..1504 7015 100 Plus
CG4095-RA 1512 CG4095-PA 122..1439 114..1428 2790 81 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:04
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0255-RA 1740 CG4094-RA 107..1595 17..1505 7445 100 Plus
l(1)G0255-RB 1668 CG4094-RB 120..1523 102..1505 7020 100 Plus
CG4095-RA 1647 CG4095-RA 191..1508 114..1428 2790 81 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 6680566..6681372 435..1241 4035 100 Plus
X 23542271 X 6682504..6683302 435..1233 2180 84.9 Plus
3L 28110227 3L 11464094..11465081 1230..246 1545 77.3 Minus
X 23542271 X 6681437..6681700 1242..1505 1320 100 Plus
X 23542271 X 6680298..6680501 236..439 1020 100 Plus
X 23542271 X 6679825..6679957 103..235 665 100 Plus
2L 23513712 2L 10190186..10190497 1231..920 540 78.2 Minus
X 23542271 X 6678530..6678617 17..104 440 100 Plus
X 23542271 X 6683371..6683557 1242..1428 335 78.6 Plus
3L 28110227 3L 11463841..11464002 1428..1267 285 78.4 Minus
X 23542271 X 6682225..6682412 242..426 230 76.1 Plus
2L 23513712 2L 10190847..10190998 570..419 190 75 Minus
Blast to na_te.dros performed on 2014-11-26 15:55:02 has no hits.

BS22465.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:14 Download gff for BS22465.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0255-RA 65..1551 17..1503 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:38 Download gff for BS22465.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0255-RA 107..1593 17..1503 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:37 Download gff for BS22465.complete
Subject Subject Range Query Range Percent Splice Strand
l(1)G0255-RA 107..1593 17..1503 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:37 Download gff for BS22465.complete
Subject Subject Range Query Range Percent Splice Strand
X 6680298..6680498 236..436 100 -> Plus
X 6678530..6678616 17..103 100 -> Plus
X 6679826..6679957 104..235 100 -> Plus
X 6680568..6681372 437..1241 100 -> Plus
X 6681437..6681698 1242..1503 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:38 Download gff for BS22465.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 6574331..6574531 236..436 100 -> Plus
arm_X 6572563..6572649 17..103 100 -> Plus
arm_X 6573859..6573990 104..235 100 -> Plus
arm_X 6575470..6575731 1242..1503 100   Plus
arm_X 6574601..6575405 437..1241 100 -> Plus

BS22465.pep Sequence

Translation from 16 to 1503

> BS22465.pep
MVLPLLQRSTLRGVQQMTKPWAAIGSLRLASQEFRVESDTFGELKVPADK
YYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNKEFGLDSKV
SEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRAIELL
GGKLGSKTPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLH
DALRAKSEEFKDIIKIGRTHTMDAVPLTLGQEFSGYAQQLAYAQERIDAC
LPRVYELALGGTAVGTGLNTRKGFAEKCAAKIAELTSLPFVTAPNKFEAL
AARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGELSLPENEPGS
SIMPGKVNPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSN
VLRSIRLLSDGSRTFTANCVNGIQANRENIAKIMNESLMLVTALNPHIGY
DKAAKIAKTAHKNGTTLKEEAINLGYLTEQQFNDWVRPEQMLGPK*

BS22465.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:19
Subject Length Description Subject Range Query Range Score Percent Strand
l(1)G0255-PA 495 CG4094-PA 1..495 1..495 2518 100 Plus
l(1)G0255-PB 467 CG4094-PB 1..467 29..495 2376 99.8 Plus
CG4095-PA 503 CG4095-PA 41..503 33..495 1958 82.1 Plus
CG6140-PB 470 CG6140-PB 8..469 33..494 1854 76.7 Plus
CG6140-PA 470 CG6140-PA 8..469 33..494 1854 76.7 Plus