BS22465.complete Sequence
1520 bp assembled on 2011-01-27
GenBank Submission: KX802614
> BS22465.complete
GAAGTTATCAGTCGACATGGTGCTACCATTATTGCAACGCTCCACGCTTC
GCGGCGTTCAACAAATGACGAAACCCTGGGCCGCCATTGGAAGTTTGCGT
CTGGCCTCCCAGGAGTTTCGCGTGGAGAGCGACACCTTTGGCGAACTGAA
GGTGCCCGCGGATAAGTACTATGGCGCCCAAACGATGCGATCCCAGATCA
ATTTCCCCATCGGCGGAGCCACCGAACGGATGCCCAAACCCGTGGTCCAG
GCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTGAACAAGGAGTTCGG
ACTGGACAGCAAGGTTAGCGAGGCGATCTCGAAGGCGGCCGACGATGTGA
TCTCTGGCAAGCTATACGACGACCACTTCCCGCTGGTCATCTGGCAGACG
GGCTCGGGCACGCAGAGCAACATGAATGTGAATGAGGTGATCAGCAATCG
TGCCATTGAGCTGCTGGGCGGCAAACTGGGCTCCAAGACGCCCGTGCATC
CCAACGATCATGTGAACAAATCGCAGAGCTCCAACGATACCTTCCCCACC
GCCATTCACATCTCGGTGGCGCTGGAGCTGAACAACAACCTTAAGCCGGC
GATTAAGACGCTGCACGATGCGCTGCGTGCCAAGTCGGAGGAGTTCAAGG
ACATTATCAAGATCGGACGCACGCATACGATGGATGCGGTGCCATTGACG
CTGGGCCAAGAGTTCAGCGGCTATGCCCAGCAATTGGCCTACGCCCAGGA
GCGCATCGATGCCTGTCTGCCGCGCGTCTATGAGCTGGCTCTGGGCGGCA
CTGCTGTGGGTACGGGTCTGAACACACGCAAGGGATTCGCCGAGAAGTGC
GCTGCAAAGATCGCCGAGCTGACCAGCCTGCCCTTCGTTACCGCGCCCAA
CAAGTTCGAGGCACTGGCTGCCCGCGATGCCATGGTGGAGGTGCATGGTG
TGCTCAACACGATCGCCGTTAGCCTGATGAAGATTGCCAACGATATTCGT
TTCCTTGGCTCCGGACCGCGTTGCGGTTTGGGTGAGCTCTCGCTACCGGA
GAACGAGCCAGGTAGCTCCATCATGCCCGGCAAGGTGAATCCCACGCAAT
GCGAGTCGCTGACAATGCTCTCCGCCCAGGTGATGGGCAATCAGGTGGCG
GTGACCATCGGTGGATCCAATGGGCACTTCGAGCTGAATGTATTCAAGCC
CCTGATCGTGTCCAATGTGCTGCGCTCCATTCGGCTATTGTCTGATGGCA
GCAGGACCTTCACTGCCAACTGTGTGAATGGCATCCAGGCGAACCGCGAG
AATATTGCCAAGATCATGAACGAGTCGCTCATGCTGGTGACCGCTCTGAA
TCCGCACATTGGTTACGACAAGGCTGCGAAAATTGCAAAGACGGCGCACA
AGAATGGCACCACACTCAAGGAGGAGGCCATCAATTTGGGTTACCTGACG
GAGCAGCAGTTCAACGACTGGGTGCGACCCGAACAGATGCTGGGACCCAA
GTGAAAGCTTTCTAGACCAT
BS22465.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:55:03
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0255-RA | 1488 | CG4094-PA | 1..1488 | 17..1504 | 7440 | 100 | Plus |
l(1)G0255-RB | 1404 | CG4094-PB | 2..1404 | 102..1504 | 7015 | 100 | Plus |
CG4095-RA | 1512 | CG4095-PA | 122..1439 | 114..1428 | 2790 | 81 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0255-RA | 1740 | CG4094-RA | 107..1595 | 17..1505 | 7445 | 100 | Plus |
l(1)G0255-RB | 1668 | CG4094-RB | 120..1523 | 102..1505 | 7020 | 100 | Plus |
CG4095-RA | 1647 | CG4095-RA | 191..1508 | 114..1428 | 2790 | 81 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 6680566..6681372 | 435..1241 | 4035 | 100 | Plus |
X | 23542271 | X | 6682504..6683302 | 435..1233 | 2180 | 84.9 | Plus |
3L | 28110227 | 3L | 11464094..11465081 | 1230..246 | 1545 | 77.3 | Minus |
X | 23542271 | X | 6681437..6681700 | 1242..1505 | 1320 | 100 | Plus |
X | 23542271 | X | 6680298..6680501 | 236..439 | 1020 | 100 | Plus |
X | 23542271 | X | 6679825..6679957 | 103..235 | 665 | 100 | Plus |
2L | 23513712 | 2L | 10190186..10190497 | 1231..920 | 540 | 78.2 | Minus |
X | 23542271 | X | 6678530..6678617 | 17..104 | 440 | 100 | Plus |
X | 23542271 | X | 6683371..6683557 | 1242..1428 | 335 | 78.6 | Plus |
3L | 28110227 | 3L | 11463841..11464002 | 1428..1267 | 285 | 78.4 | Minus |
X | 23542271 | X | 6682225..6682412 | 242..426 | 230 | 76.1 | Plus |
2L | 23513712 | 2L | 10190847..10190998 | 570..419 | 190 | 75 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:55:02 has no hits.
BS22465.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:14 Download gff for
BS22465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0255-RA | 65..1551 | 17..1503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:38 Download gff for
BS22465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0255-RA | 107..1593 | 17..1503 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:37 Download gff for
BS22465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(1)G0255-RA | 107..1593 | 17..1503 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:37 Download gff for
BS22465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 6680298..6680498 | 236..436 | 100 | -> | Plus |
X | 6678530..6678616 | 17..103 | 100 | -> | Plus |
X | 6679826..6679957 | 104..235 | 100 | -> | Plus |
X | 6680568..6681372 | 437..1241 | 100 | -> | Plus |
X | 6681437..6681698 | 1242..1503 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:38 Download gff for
BS22465.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 6574331..6574531 | 236..436 | 100 | -> | Plus |
arm_X | 6572563..6572649 | 17..103 | 100 | -> | Plus |
arm_X | 6573859..6573990 | 104..235 | 100 | -> | Plus |
arm_X | 6575470..6575731 | 1242..1503 | 100 | | Plus |
arm_X | 6574601..6575405 | 437..1241 | 100 | -> | Plus |
BS22465.pep Sequence
Translation from 16 to 1503
> BS22465.pep
MVLPLLQRSTLRGVQQMTKPWAAIGSLRLASQEFRVESDTFGELKVPADK
YYGAQTMRSQINFPIGGATERMPKPVVQAMGILKKAAAEVNKEFGLDSKV
SEAISKAADDVISGKLYDDHFPLVIWQTGSGTQSNMNVNEVISNRAIELL
GGKLGSKTPVHPNDHVNKSQSSNDTFPTAIHISVALELNNNLKPAIKTLH
DALRAKSEEFKDIIKIGRTHTMDAVPLTLGQEFSGYAQQLAYAQERIDAC
LPRVYELALGGTAVGTGLNTRKGFAEKCAAKIAELTSLPFVTAPNKFEAL
AARDAMVEVHGVLNTIAVSLMKIANDIRFLGSGPRCGLGELSLPENEPGS
SIMPGKVNPTQCESLTMLSAQVMGNQVAVTIGGSNGHFELNVFKPLIVSN
VLRSIRLLSDGSRTFTANCVNGIQANRENIAKIMNESLMLVTALNPHIGY
DKAAKIAKTAHKNGTTLKEEAINLGYLTEQQFNDWVRPEQMLGPK*
BS22465.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(1)G0255-PA | 495 | CG4094-PA | 1..495 | 1..495 | 2518 | 100 | Plus |
l(1)G0255-PB | 467 | CG4094-PB | 1..467 | 29..495 | 2376 | 99.8 | Plus |
CG4095-PA | 503 | CG4095-PA | 41..503 | 33..495 | 1958 | 82.1 | Plus |
CG6140-PB | 470 | CG6140-PB | 8..469 | 33..494 | 1854 | 76.7 | Plus |
CG6140-PA | 470 | CG6140-PA | 8..469 | 33..494 | 1854 | 76.7 | Plus |