Clone BS22466 Report

Search the DGRC for BS22466

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:224
Well:66
Vector:pDNR-Dual
Associated Gene/TranscriptCG30493-RB
Protein status:BS22466.pep: full length peptide match
Sequenced Size:1013

Clone Sequence Records

BS22466.complete Sequence

1013 bp assembled on 2011-01-27

GenBank Submission: KX802460

> BS22466.complete
GAAGTTATCAGTCGACATGGCAAACGTGCGCTGTTTATACAAGCTTATTC
GTCTGCAGAAGCTCCTGCTGCCGCTCAATGCGACTAGCTCCCGTTTGGCT
CCACTGCAGCCGAGACCATTGACATTTTTAATAGCAAGGAGTTATGGAAA
GGATGAGAAGAAAGCCAATCTAGAAGACTTTAGAGCCCGCGAGGAGCAGC
GCGAAAGGGAGCGGGATGCGGCCGATCAAGCTGCCGAAAAGGCATCACAA
AAAGAAGCAGGCGGAGGTGGTGGACTGGGTGCAAAAGGATCAGAGTCTAC
AGGCCCAGAAGATGACGCCAAGCAAGCCAAGGTGGATGCCATAAGGGCAA
AGATCCTGGACGCTGCATTGCAGCATGTGCCCCAGCAGGGCTGGACCCGC
CAGGCCATCATTCTGGGTGCCGAGGAAAGTGGCTATCCTAGCGTGGTGCA
CGGCATGTTTCCCGAGGGTGGCTTCGCGCTGGTCTCCCACTTCAACGGCA
AGTGCAACGCCCAGCTGGTGGAAAGCCTGCAGCAAAAGACAGATGGTGGC
AAGCAGGAGGTGGAGGATCCTCTAGATTTTCTGGTACAAGCAGTGCGCCA
GCGTCTGGAGATGGTTACTCCCTACAAGACGCATTGGCCCCAGGCGATGG
CCCTATTAGCCCAGCCCCAGCATGCGCCCACAGCTCTGGCCCAGGTGCTC
ACCCTGGTGGATGACATCTGCTACTACTCCGGAGATCGATCTGTGGATTT
CGGTTGGTACACGAGACGTGTGGGTCTGGCGACCATCATGAAGATGACCG
AGTTGTACTTCCTGCAGGACAAGTCCCCAGGACATGCGCAGACCTGGGAG
TTCCTCAAGAGCCGCATGGACGAGGCTGTGCAACTCCAAATGATGCTATC
CCAAACAGAGGGCATGACGCACACGTTCCAACGCTCCTTTAACTCGGCGT
TCATCACGGCGCGTAATATTCTCGGTCTGGGCTACAATCGTAACTAGAAG
CTTTCTAGACCAT

BS22466.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:55:11
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-RB 981 CG30493-PB 1..981 17..997 4905 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:55:12
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-RB 1577 CG30493-RB 75..1055 17..997 4905 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:09
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 7701944..7702614 78..748 3355 100 Plus
2R 25286936 2R 7702674..7702884 749..959 1055 100 Plus
2R 25286936 2R 7699327..7699387 17..77 305 100 Plus
2R 25286936 2R 7702940..7702979 958..997 200 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:55:10 has no hits.

BS22466.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:15 Download gff for BS22466.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 47..1027 17..997 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:47:42 Download gff for BS22466.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 75..1055 17..997 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:06:43 Download gff for BS22466.complete
Subject Subject Range Query Range Percent Splice Strand
CG30493-RB 75..1055 17..997 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:06:43 Download gff for BS22466.complete
Subject Subject Range Query Range Percent Splice Strand
2R 7699327..7699387 17..77 100 -> Plus
2R 7701944..7702614 78..748 100 -> Plus
2R 7702674..7702883 749..958 100 -> Plus
2R 7702941..7702979 959..997 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:47:42 Download gff for BS22466.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 3586832..3586892 17..77 100 -> Plus
arm_2R 3589449..3590119 78..748 100 -> Plus
arm_2R 3590179..3590388 749..958 100 -> Plus
arm_2R 3590446..3590484 959..997 100   Plus

BS22466.pep Sequence

Translation from 16 to 996

> BS22466.pep
MANVRCLYKLIRLQKLLLPLNATSSRLAPLQPRPLTFLIARSYGKDEKKA
NLEDFRAREEQRERERDAADQAAEKASQKEAGGGGGLGAKGSESTGPEDD
AKQAKVDAIRAKILDAALQHVPQQGWTRQAIILGAEESGYPSVVHGMFPE
GGFALVSHFNGKCNAQLVESLQQKTDGGKQEVEDPLDFLVQAVRQRLEMV
TPYKTHWPQAMALLAQPQHAPTALAQVLTLVDDICYYSGDRSVDFGWYTR
RVGLATIMKMTELYFLQDKSPGHAQTWEFLKSRMDEAVQLQMMLSQTEGM
THTFQRSFNSAFITARNILGLGYNRN*

BS22466.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG30493-PB 326 CG30493-PB 1..326 1..326 1683 100 Plus