BS22470.complete Sequence
2237 bp assembled on 2011-02-18
GenBank Submission: KX805225
> BS22470.complete
GAAGTTATCAGTCGACATGTGGGAAAAGCTGGTGAACTGCATCAAGAGCA
ATGGTGGCAATGGTGGCGTCAAGAATGTAAGCTGCCAAGTTGTCGAACTG
GCGGATCTGATGAAACAGGTGCCGCCGAACCAGATGCACAAGTTCAAAAT
GTTTGCCAAGAAGCACGAGGAGTACAAGGACCGCGTTCGTAAGTATCCGG
AATCGATGCCGACAATCGACTGGGAATACTACCGTCAGAATGTGAGAGAA
GAGTTTGTCGATTGGGTGAAGGGATACGAGACCAAGTATGATAAATTGCA
TTCCGTATTCGAGAATCGACATGCCATAGTAGATCACAAGCGATACTTTG
AACTCGTCGATGAAGAAAAGAAGGTGGTGACAAAATGTATTAGCGAATAC
AAGGCGGAGTCGGATAAAAGAATCCAGGAGCTAACCGAAAAGTTGGAGTT
CGTGAAGGCAATGCGACCCTATTCCGAAATGACCATGGAGGAATTTTGTT
TTGCCCGTCCGCACTTGGCACCCGATTTCATCAACAAGCCCACTTTCTGG
CCACACACTCCTGAAGAGCAAATGCCAGGTCCATCGGATCCAGAGGCAGC
AGCTGCTTTGCATCACGAAGAGGAGCCCGAACCGCCAAAGAAACCAGCTC
CCGAAAAGTTACCAGATAAGCCTAGTGGAGAAGGAAAGCCTCCGGCGGCT
GCGGCTCCAAAGGAGCCAAAAGAACCCGTTGTCGACACCTCTCAGTTGGC
CGAAAAGGCCACTTTAATCGCCAAAGATTTGATGGCCAAAGCTATTGTTC
TTTTTAATAGTCTTAAAGAAAAGATGTCGGGTCTGGCCAAGAATGTTCAG
AAAAAGGCAGACGCCGCCAAAGCTGCGCGTTCCGAAACTGCCAGCAAATC
CGCAACGCCTACAGCCGCACCAACCAAGTCACTGGACAGCATTACGGAAC
GAGAGTCTGGACCGAACATCTGCAACCAAACTATAATACGCAGCGAGGAG
GCAGAGGCCAATCCGGAGGTTAAGGCCAGGCATACTAACCTTTCCATTGA
GGCGGATCCTTGCGATGCCCAGGAGGAGCGAGCCAGGGAGATAGCTAGGA
CATTGGAGCGCAAGAGACAATTAAAAGAGGCGGAGGAATGGGAGAAACAC
AAGACCAAGAAAGATCCTTGTGACGCCGAAAAGGAAACTGATCCTTGCAA
GCTCATGGAAGAGGAAACCGTTTGCAAGCCAGATCCTTGCAAAGCGAAAG
AGGAAGAAGCAGTCTGTAAGCCAGATCCCTGCCAGCAGAAGGAGAAAGAA
GATGACATTTGCAAGCCCGATCCTTGTAAGCCGAAGGACGAAGAGGGCTC
CTGTGAAGATGAGGAGGATCCTTGCAAGAAGAAGCCGAAATGCGATGGTG
ATTACCAATTCGGTGGTGACAATGAAGGCGGTTCGACAAAATCGAAGCAG
CAGGACCAGGTCTTCATCAACATATCCGAGTGCAGTAAGGAACTCGCCAA
GCAGGAAGAAAAGAAATCTGGTGATTCGGGTAAGCCCAAGGAAAAGGCAT
CACTGTCAGAAATTCCACAAGGATCAGATCAAAAACCCGTGCTTGGCATG
CAGATAACAGAATCCAAGGACTCTAAAAAGGATCACAAAGCTAGTATTGA
AGGCGCAAATGAAATTGGTCCTGTGTATACAGATCCCAATCAACTTGCAG
AGCTGCTAGTCCAGAAAAAGGAAAAACCAGTTATAATTGAAGAAGCACAG
AAGCCCGAAGATGACAAACCAATTACCATATATCCCAAGCTAGAGATATC
AGCCAATCCGAAGGGCGATCAAGTCAAGCAAGAAGCTGAAGGACAAAAGT
CACCCAAGGATATGGCCAAGCAGGTGTTCACAATGGCCTCAGGAGCTGCT
ACTCTACTAACAGAAGCCACCAACACACTGGAGGACTTGAAGAGGAAGAA
GGAGGCTCGTCTGGAGGCACTGGAACAGGCCTACACTTCGGCCCAAAGGC
AGGCCCAAGGAGCTCTGGCCGAGGCATCGAAGGCCGTGGAAGCCGCCAAC
AATTTGGCCATAAGATCTGCCGAACAAACTGGCGAAGTGAGCAGCCGAGA
TCGCGAGGCATTGGAAATGGCCGAAAAGCATGCCATTTTGGCCAAAATGC
TGGCCGGACGTGCAGTGGCCTTGAAGGACGAAATCGCTCGAGTTCTCAAG
GATCTTAAGAAGAAAAAGTAAAAGCTTTCTAGACCAT
BS22470.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:44:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7813-RA | 2205 | CG7813-PA | 1..2205 | 17..2221 | 11025 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:44:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7813-RA | 2375 | CG7813-RA | 81..2285 | 17..2221 | 11025 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:44:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16496979..16499019 | 2221..181 | 10205 | 100 | Minus |
| 2R | 25286936 | 2R | 16499186..16499349 | 180..17 | 820 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:44:36 has no hits.
BS22470.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:38:03 Download gff for
BS22470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 81..2270 | 17..2206 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:12 Download gff for
BS22470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 81..2270 | 17..2206 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:10 Download gff for
BS22470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7813-RA | 81..2270 | 17..2206 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:10 Download gff for
BS22470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16496994..16499019 | 181..2206 | 100 | <- | Minus |
| 2R | 16499186..16499349 | 17..180 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:12 Download gff for
BS22470.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12384499..12386524 | 181..2206 | 100 | <- | Minus |
| arm_2R | 12386691..12386854 | 17..180 | 100 | | Minus |
BS22470.pep Sequence
Translation from 16 to 2220
> BS22470.pep
MWEKLVNCIKSNGGNGGVKNVSCQVVELADLMKQVPPNQMHKFKMFAKKH
EEYKDRVRKYPESMPTIDWEYYRQNVREEFVDWVKGYETKYDKLHSVFEN
RHAIVDHKRYFELVDEEKKVVTKCISEYKAESDKRIQELTEKLEFVKAMR
PYSEMTMEEFCFARPHLAPDFINKPTFWPHTPEEQMPGPSDPEAAAALHH
EEEPEPPKKPAPEKLPDKPSGEGKPPAAAAPKEPKEPVVDTSQLAEKATL
IAKDLMAKAIVLFNSLKEKMSGLAKNVQKKADAAKAARSETASKSATPTA
APTKSLDSITERESGPNICNQTIIRSEEAEANPEVKARHTNLSIEADPCD
AQEERAREIARTLERKRQLKEAEEWEKHKTKKDPCDAEKETDPCKLMEEE
TVCKPDPCKAKEEEAVCKPDPCQQKEKEDDICKPDPCKPKDEEGSCEDEE
DPCKKKPKCDGDYQFGGDNEGGSTKSKQQDQVFINISECSKELAKQEEKK
SGDSGKPKEKASLSEIPQGSDQKPVLGMQITESKDSKKDHKASIEGANEI
GPVYTDPNQLAELLVQKKEKPVIIEEAQKPEDDKPITIYPKLEISANPKG
DQVKQEAEGQKSPKDMAKQVFTMASGAATLLTEATNTLEDLKRKKEARLE
ALEQAYTSAQRQAQGALAEASKAVEAANNLAIRSAEQTGEVSSRDREALE
MAEKHAILAKMLAGRAVALKDEIARVLKDLKKKK*
BS22470.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:08:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7813-PA | 734 | CG7813-PA | 1..734 | 1..734 | 3828 | 100 | Plus |
| ATPsyn-d-PC | 178 | CG6030-PC | 4..178 | 19..200 | 241 | 33.7 | Plus |
| ATPsyn-d-PA | 178 | CG6030-PA | 4..178 | 19..200 | 241 | 33.7 | Plus |
| ATPsyn-d-PB | 178 | CG6030-PB | 4..178 | 19..200 | 241 | 33.7 | Plus |
| Strn-Mlck-PT | 7905 | CG44162-PT | 2638..3227 | 116..729 | 181 | 22.7 | Plus |
