BS22485.complete Sequence
3098 bp assembled on 2011-02-18
GenBank Submission: KX800564
> BS22485.complete
GAAGTTATCAGTCGACATGGCAGCGGGAAGAGCAGCCGCTACGCTGGAGG
CTCCGGGACCGCCCAGCGGTCAGGACATAGCCAGCGACAACAGCGCCCAG
CGCCGCACGCTGGCGACGAAGGTGCGTCGAAAAGGGCCACGCCCCCAACG
GCGCCTGCACCCGCCCCTGCGCCCTCGCCTGCCGCTCCATTTGCACCTGC
TACTCTGGCTGCTGTGCTGCTGTTCTCAGCTGGGCCAGCTGAGGGCCGAG
TGTCCAGCGGTGTGCGAGTGCAAGTGGAAGAGTGGCAAGGAGTCCGTCTT
GTGCCTTAACGCCAACCTAACCCACATCCCGCAGCCGCTGGACGCGGGAA
CTCAGTTGCTGGACCTTAGCGGCAATGAGATCCAACTAATACCCGACGAT
AGCTTCGCAACCGCCCAGTTGCTCAACCTACAGAAGGTGTACCTGGCCAG
GTGTCACCTCCGGCTTATCGAACGCCATGCCTTCCGTAAGCTGATCAATC
TAGTGGAACTGGATCTAAGCCAGAACCTGCTCTCGGCAATACCCTCATTG
GCGCTCTACCATGTCTCAGAGCTAAGGGAGCTCCGACTGAGTGGCAATCC
CATACTGAGAGTGCCAGACGATGCATTTGGTCATGTCCCACAATTGGTGA
AGCTGGAGCTGAGCGACTGCCGCCTTTCGCACATCGCTGTGCGAGCATTT
GCCGGGCTGGAGAGCAGTCTGGAGTGGCTAAAACTGGATGGGAATCGGCT
GAGCGAGGTCAGGAGTGGCACGATCACCTCGCTGGCTTCACTGCATGGTC
TGGAGTTGGCGCGCAATACCTGGAATTGCAGCTGCTCCTTGCGTCCTTTG
AGGGCCTGGATGCTGCAGCAGAATATACCGAGTGGCATACCGCCAACATG
TGAGTCTCCTCCTAGATTGTCCGGGAGGGCTTGGGATAAGCTCGATGTAG
ATGACTTTGCGTGCGTTCCACAAATTGTGGCCACGGACACCACAGCGCAT
GGAGTGGAGGGCAGGAACATAACCATGAGCTGCTACGTGGAAGGAGTACC
CCAACCGGCTGTCAAGTGGCTGCTTAAAAACCGACTGATAGCCAATCTCA
GTGCTGGCGGGGATGGTGACTCCGATTCGGAGCCCAGGACAGCGGCAGCA
ACTCAGGGTAGGAAGACCTATGTGGTCAACATGCTGAGAAATGCCTCGAA
CCTGACCATTCTCACGGCTGACATGCAGGATGCCGGGATCTATACGTGTG
CGGCGGAAAATAAGGCTGGAAAAGTGGAGGCCAGTGTGACTCTGGCAGTA
TCCCGTAGACCCCCGGAAGCTCCGTGGGGCGTAAGAATTATTCTGCTGGG
GGCGGTAGCCGCTCTGCTCCTCGTCGGTGGATCCTCCTTTGCGGCCATTT
GCTTGTGTTCCCTACAAAGGCGAAGAAAGCTGCGTCTCTGGAACTCTGTA
CCTCCTGTGAGGAGAAGCGAGAGCTACGAAAAGATCGAGATGACGGCCAG
AACGAGACCGGATCTGGGAGGAGGGGCTAGTTGCGGAGGCGGCAGTGCCA
CGGGCGCCGGACTCTTTCACGATGCCGAGGAGCAGGGCTATCTGCGGGCA
GCTCATACGCCACTAAATGACAACGATGCCGGGCAGGCGGCGGCCATCGT
AAATCCGAGTGCAGGAAGTGCACAGCGAAGAAATGGAGACTACCTGCACG
TGTCCACCCACTGCGATGATGAGGAGGAGGACCAACAGCTGCATCACCAC
CCACAACAGCAGCCCGCGAGCCAGCACCACCCACATCCCAATCAGCAGCA
GCATCAGCAAAGGAAGGGCTCCCAGGGCCATGTTGTCTCCGCATCCGGGG
CGAATAATTCAGCACCGCTGGAGGAAACGGATCTGCACATACCGCGCCTC
ATCGACATCGGCGGCACCGATTCCGCATCGAGTTCAATCTCCAGCCAGGT
GGACGCTGCTGCCCGCTTAGCGGGCTATGCCGGACACACCTGGAAGACCA
CACCCATTGCCACCACCAAGATCAATTCCCCGCACAGCAAACCAGTGACC
TCGGCGGCACCATCGTCTCTGAATACACAGGCCACGCCATACGCGCACTA
TGGAAACCATCCGGCGGACGAGATGGCCACCTCGGTGTTCTGCAGCGAGG
GGCAGGAGAGCGACTTGTTTGATAGCAACTATCCGGATCTGCTGGATATA
GCCAAGTATGCAGTGGCCCAGGCGCAACAGGAAGGTCGGGGTCAGGGTTA
TGCCCAAGCCACGACCACTCCAAATGGGGGCTTGTGCACGCTCCCCCGCA
AACTAAAGACCAGTGGAAAGTACTTCCGCAACTCCTCGGATAGCCAATCA
CCCCTGCTGGCGGATAACTCCAGTAAATATGGTAGTAGCACCTTGGGCGA
TGGAAGCTTCCTTAACGAAGCGATGGGTCTGGGCAGGAGATATTCTGCGG
AATCGAGTTATGCAAACTATTCAAGCACGGCCACCTACACGGGCGGTGGC
CAGCGGGCCAATAGTTTCCTTAACCTCGTGCAAAGTGGCGCCCACCAAGG
GAAACTGCTGCCGAGTCATCTGGGCCAGAAGCCCAGCCTGCCCTCAAGTC
CGGTCCAGCATCAGCGATCTCTGTCGAGTGCGGCCACGCCCCTTCTGGAC
TTCTCAGCCCTGGCATCGAGGGCCGCCGGAGCTGCCAACACATCGGTGGC
CGCTTATGATTATCATGCCGCGCAGCTGGAGAGGTTTCTGGAAGAGTACC
GCAACCTGCAGGATCAGCTGTGCAAGATGAAGGAGACCTGCGATACGATC
CGTAAAAAGGAGACTCCTTTGCGAGTGGCCATTGGACAGTCGGCTGCGCA
GTTGGCGGATCCCGTAATGTACAGTGCAGCCTCGCACAGTCCAAAACCGC
CGGCGACCAGCAATCTGAAGACAAAGACCCTACTCCCAGGACAACCACCC
GATCCACCACCATACTGGTTGCACCGGAACGCCATGTTGAAGCGGTTAAA
TGGTGATGGAAGTGCTGGTACTAATGGTTCAGGTGGATCTCCCGCCTCTC
CACAGCCCAGACAGGATATTTTCAAGAGCTAAAAGCTTTCTAGACCAT
BS22485.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:45:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek3-RB | 3066 | CG4192-PB | 1..3066 | 17..3082 | 15330 | 100 | Plus |
| kek3-RA | 3066 | CG4192-PA | 1..3066 | 17..3082 | 15330 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:45:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek3-RB | 4696 | CG4192-RB | 679..3744 | 17..3082 | 15330 | 100 | Plus |
| kek3-RA | 4361 | CG4192-RA | 743..3808 | 17..3082 | 15330 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:45:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 15578953..15580850 | 17..1914 | 9490 | 100 | Plus |
| 2L | 23513712 | 2L | 15581858..15583026 | 1914..3082 | 5845 | 100 | Plus |
Blast to na_te.dros performed 2014-11-26 15:45:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2243..2399 | 1655..1810 | 197 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6741..6826 | 1722..1810 | 194 | 71.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6833 | 1725..1828 | 187 | 67.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6762..6870 | 1722..1830 | 185 | 63.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6798..6886 | 1725..1810 | 185 | 70.8 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1052..1155 | 1706..1812 | 185 | 66.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2335..2420 | 1725..1810 | 178 | 67.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2785..2866 | 1734..1815 | 176 | 68.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6777..6914 | 1725..1866 | 168 | 60.6 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1049..1141 | 1725..1816 | 156 | 64.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6846..6937 | 1731..1825 | 153 | 64.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2391 | 1738..1819 | 149 | 68.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2377..2458 | 1725..1809 | 147 | 67.1 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1028..1163 | 1658..1796 | 147 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2389..2471 | 1725..1810 | 135 | 64 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2307..2372 | 1754..1816 | 133 | 71.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6720..6793 | 1743..1810 | 131 | 68.9 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2446..2516 | 1731..1810 | 128 | 67.5 | Plus |
BS22485.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:38:03 Download gff for
BS22485.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RB | 679..3742 | 17..3080 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:04:16 Download gff for
BS22485.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RA | 743..3806 | 17..3080 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:48:18 Download gff for
BS22485.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| kek3-RA | 743..3806 | 17..3080 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:48:18 Download gff for
BS22485.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 15578953..15580850 | 17..1914 | 100 | -> | Plus |
| 2L | 15581859..15583024 | 1915..3080 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:04:16 Download gff for
BS22485.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 15578953..15580850 | 17..1914 | 100 | -> | Plus |
| arm_2L | 15581859..15583024 | 1915..3080 | 100 | | Plus |
BS22485.pep Sequence
Translation from 16 to 3081
> BS22485.pep
MAAGRAAATLEAPGPPSGQDIASDNSAQRRTLATKVRRKGPRPQRRLHPP
LRPRLPLHLHLLLWLLCCCSQLGQLRAECPAVCECKWKSGKESVLCLNAN
LTHIPQPLDAGTQLLDLSGNEIQLIPDDSFATAQLLNLQKVYLARCHLRL
IERHAFRKLINLVELDLSQNLLSAIPSLALYHVSELRELRLSGNPILRVP
DDAFGHVPQLVKLELSDCRLSHIAVRAFAGLESSLEWLKLDGNRLSEVRS
GTITSLASLHGLELARNTWNCSCSLRPLRAWMLQQNIPSGIPPTCESPPR
LSGRAWDKLDVDDFACVPQIVATDTTAHGVEGRNITMSCYVEGVPQPAVK
WLLKNRLIANLSAGGDGDSDSEPRTAAATQGRKTYVVNMLRNASNLTILT
ADMQDAGIYTCAAENKAGKVEASVTLAVSRRPPEAPWGVRIILLGAVAAL
LLVGGSSFAAICLCSLQRRRKLRLWNSVPPVRRSESYEKIEMTARTRPDL
GGGASCGGGSATGAGLFHDAEEQGYLRAAHTPLNDNDAGQAAAIVNPSAG
SAQRRNGDYLHVSTHCDDEEEDQQLHHHPQQQPASQHHPHPNQQQHQQRK
GSQGHVVSASGANNSAPLEETDLHIPRLIDIGGTDSASSSISSQVDAAAR
LAGYAGHTWKTTPIATTKINSPHSKPVTSAAPSSLNTQATPYAHYGNHPA
DEMATSVFCSEGQESDLFDSNYPDLLDIAKYAVAQAQQEGRGQGYAQATT
TPNGGLCTLPRKLKTSGKYFRNSSDSQSPLLADNSSKYGSSTLGDGSFLN
EAMGLGRRYSAESSYANYSSTATYTGGGQRANSFLNLVQSGAHQGKLLPS
HLGQKPSLPSSPVQHQRSLSSAATPLLDFSALASRAAGAANTSVAAYDYH
AAQLERFLEEYRNLQDQLCKMKETCDTIRKKETPLRVAIGQSAAQLADPV
MYSAASHSPKPPATSNLKTKTLLPGQPPDPPPYWLHRNAMLKRLNGDGSA
GTNGSGGSPASPQPRQDIFKS*
BS22485.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:31:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| kek3-PB | 1021 | CG4192-PB | 1..1021 | 1..1021 | 5331 | 100 | Plus |
| kek3-PA | 1021 | CG4192-PA | 1..1021 | 1..1021 | 5331 | 100 | Plus |
| kek1-PC | 880 | CG12283-PC | 85..517 | 74..514 | 729 | 38.3 | Plus |
| kek1-PB | 880 | CG12283-PB | 85..517 | 74..514 | 729 | 38.3 | Plus |
| kek2-PA | 894 | CG4977-PA | 16..450 | 75..519 | 636 | 34.3 | Plus |
