Clone BS22490 Report

Search the DGRC for BS22490

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:224
Well:90
Vector:pDNR-Dual
Associated Gene/TranscriptCG9624-RA
Protein status:BS22490.pep: gold
Sequenced Size:900

Clone Sequence Records

BS22490.complete Sequence

900 bp assembled on 2011-01-27

GenBank Submission: KX800978

> BS22490.complete
GAAGTTATCAGTCGACATGAATACCTCCGAAGTCAAACGAACGCTGGGTA
GCCCCTTCTTCGACGTGCTATGGCCATTGATCCTGGACGAGAATGTCTGT
CGCATCGAGACCAAGCCGGACGAATTCTTTGTGCCCCGGCAGCCCTTCAA
TCGACTGGATTGGCATATCTATCTGTCCCAGGTGGGCTTTCCTTTCTACA
TGCCGCCACATGAGCTGCGCTGCTGCAAAGGAGCCCAAAGGGAGGAGATC
GAGAACGAGGATGCTGAGAATGCCTTAAACCAGGAGGTGGAGGAGCGAAC
GGCGTCGAATCAGGTGGACTTTCTGCGCCATGGATCCCGGGACATTAGAC
CCATAGATGAGGTGGTAAACAAACTGAGGATGGAGCAGGAGCGTCGCCAG
AAGTTGGCGTACGACTTTGCCAATCGGCGCTATCCTTGGACCATGCAAAC
TCCCAGTCACGAACTGGGCTTCACCATCACTGAGGAGCTGCAGAAGTGCT
TCAAGGGACCCATGGAGCTGGACATCTTGAGGGCCATTCATGATCACGAC
TGCAAGCTAATGATTATCGATCTGGGCACTGATGTGGACATTAAGGACTG
CCAGCGCTGGATAAAGTTTCGTCCATATATTCAGTTACTGGCATTGCCCC
GAACACCTCGCATGGAACGATCGCTTCAGGTGCTCAATGTCTTCCACACG
TATTTGGTGGAAGAATCGGCTGATAACTCATGGCACGATGAGGTGCAATA
CTCCCTTCGCACAGCTTTTGTGCACGCACAGAAAAATCAGCTCCTTAAGT
CCTGCGGAGAGCCATTTGTCTTCGTATTTAGTCGTTTTCGTGGCATCTGC
ACCTGCGATACCTATAAGATAATCCGACGGGCATAAGCTTTCTAGACCAT

BS22490.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-RA 870 CG9624-PA 1..869 17..885 4330 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:02
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-RA 1049 CG9624-RA 77..945 17..885 4330 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 14228201..14229069 885..17 4330 99.9 Minus
Blast to na_te.dros performed on 2014-11-26 15:56:00 has no hits.

BS22490.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:16 Download gff for BS22490.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 92..959 17..884 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:01 Download gff for BS22490.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 92..959 17..884 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:01 Download gff for BS22490.complete
Subject Subject Range Query Range Percent Splice Strand
CG9624-RA 77..944 17..884 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:01 Download gff for BS22490.complete
Subject Subject Range Query Range Percent Splice Strand
3R 14228202..14229069 17..884 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:01 Download gff for BS22490.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 10053924..10054791 17..884 99   Minus

BS22490.pep Sequence

Translation from 16 to 885

> BS22490.pep
MNTSEVKRTLGSPFFDVLWPLILDENVCRIETKPDEFFVPRQPFNRLDWH
IYLSQVGFPFYMPPHELRCCKGAQREEIENEDAENALNQEVEERTASNQV
DFLRHGSRDIRPIDEVVNKLRMEQERRQKLAYDFANRRYPWTMQTPSHEL
GFTITEELQKCFKGPMELDILRAIHDHDCKLMIIDLGTDVDIKDCQRWIK
FRPYIQLLALPRTPRMERSLQVLNVFHTYLVEESADNSWHDEVQYSLRTA
FVHAQKNQLLKSCGEPFVFVFSRFRGICTCDTYKIIRRA*

BS22490.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9624-PA 289 CG9624-PA 1..289 1..289 1560 100 Plus