BS22490.complete Sequence
900 bp assembled on 2011-01-27
GenBank Submission: KX800978
> BS22490.complete
GAAGTTATCAGTCGACATGAATACCTCCGAAGTCAAACGAACGCTGGGTA
GCCCCTTCTTCGACGTGCTATGGCCATTGATCCTGGACGAGAATGTCTGT
CGCATCGAGACCAAGCCGGACGAATTCTTTGTGCCCCGGCAGCCCTTCAA
TCGACTGGATTGGCATATCTATCTGTCCCAGGTGGGCTTTCCTTTCTACA
TGCCGCCACATGAGCTGCGCTGCTGCAAAGGAGCCCAAAGGGAGGAGATC
GAGAACGAGGATGCTGAGAATGCCTTAAACCAGGAGGTGGAGGAGCGAAC
GGCGTCGAATCAGGTGGACTTTCTGCGCCATGGATCCCGGGACATTAGAC
CCATAGATGAGGTGGTAAACAAACTGAGGATGGAGCAGGAGCGTCGCCAG
AAGTTGGCGTACGACTTTGCCAATCGGCGCTATCCTTGGACCATGCAAAC
TCCCAGTCACGAACTGGGCTTCACCATCACTGAGGAGCTGCAGAAGTGCT
TCAAGGGACCCATGGAGCTGGACATCTTGAGGGCCATTCATGATCACGAC
TGCAAGCTAATGATTATCGATCTGGGCACTGATGTGGACATTAAGGACTG
CCAGCGCTGGATAAAGTTTCGTCCATATATTCAGTTACTGGCATTGCCCC
GAACACCTCGCATGGAACGATCGCTTCAGGTGCTCAATGTCTTCCACACG
TATTTGGTGGAAGAATCGGCTGATAACTCATGGCACGATGAGGTGCAATA
CTCCCTTCGCACAGCTTTTGTGCACGCACAGAAAAATCAGCTCCTTAAGT
CCTGCGGAGAGCCATTTGTCTTCGTATTTAGTCGTTTTCGTGGCATCTGC
ACCTGCGATACCTATAAGATAATCCGACGGGCATAAGCTTTCTAGACCAT
BS22490.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:56:01
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9624-RA | 870 | CG9624-PA | 1..869 | 17..885 | 4330 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:56:02
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9624-RA | 1049 | CG9624-RA | 77..945 | 17..885 | 4330 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:55:59
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 14228201..14229069 | 885..17 | 4330 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-26 15:56:00 has no hits.
BS22490.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-28 16:05:16 Download gff for
BS22490.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9624-RA | 92..959 | 17..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 01:48:01 Download gff for
BS22490.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9624-RA | 92..959 | 17..884 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:07:01 Download gff for
BS22490.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9624-RA | 77..944 | 17..884 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:07:01 Download gff for
BS22490.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 14228202..14229069 | 17..884 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 01:48:01 Download gff for
BS22490.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 10053924..10054791 | 17..884 | 99 | | Minus |
BS22490.pep Sequence
Translation from 16 to 885
> BS22490.pep
MNTSEVKRTLGSPFFDVLWPLILDENVCRIETKPDEFFVPRQPFNRLDWH
IYLSQVGFPFYMPPHELRCCKGAQREEIENEDAENALNQEVEERTASNQV
DFLRHGSRDIRPIDEVVNKLRMEQERRQKLAYDFANRRYPWTMQTPSHEL
GFTITEELQKCFKGPMELDILRAIHDHDCKLMIIDLGTDVDIKDCQRWIK
FRPYIQLLALPRTPRMERSLQVLNVFHTYLVEESADNSWHDEVQYSLRTA
FVHAQKNQLLKSCGEPFVFVFSRFRGICTCDTYKIIRRA*
BS22490.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:57:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG9624-PA | 289 | CG9624-PA | 1..289 | 1..289 | 1560 | 100 | Plus |