BS22492.complete Sequence
2321 bp assembled on 2011-02-18
GenBank Submission: KX800326
> BS22492.complete
GAAGTTATCAGTCGACATGCCCGCCCACTGCGCCGTGATAAATTGCAGCC
ATAAGTATGTGCACGCGGGCAGCATTTCATTTCACAGATTTCCATTCAAA
CGGAAGGATCTTCTACAGAAATGGAAGGAATTTACCCAGAGGAGTGCTCA
GTGGATGCCCTCAAAATGGAGTGCGCTGTGCAGTCGGCACTTTGGTGATG
AGGACTTTAATTGCAGCAATAATCGGAAAACGCTTAAGAAAAATGCTGTG
CCATCAATTAGGGTTTCGGAAGATGACTCCATGAGTGGGCACTTGGAACA
GGTGTCCCCAAGCAATAGGCCAACGCACAAGCAAACTCTTTCTAGTGCCG
CCGAATCAGCAGCAACAGGTGTTAAAGCCACTTGCCGCTTTTGTGGTTCC
TCGGCCATCAATTGCTCCTCGTTTGACAAGAGTTTTGAGCTCTTTGGCAT
GATCCAGAAGTGCTTTCCTACGCTACAGATTCTTCAGGACGACACCTTGC
CCAAGGAAATATGCCAGGAGTGCTGCCTCCAATTGGAGCGCTTTTCCCAG
TTCATCGATGTGGTGATGTTGGCGCAGAGTGAATTGCAAAGAAAATACCG
CCGACAACTGAAAATCAAACAGGAACCCTTGGTTCGTGTGAAACAGGAGG
CCTGCGAGAGCTTGGACAATCTTTTTCCTGATGAACTGGACATGGGTTTG
GAGCAGGACGATGGCTGCGATCAGGAAGAAACTGAACAAAAGTTTCAGTT
CTGCGAGTTCCCTATGCTAAATGCCCAAGACATTATCAACAATTGTGATA
TCATGGAGATAATCAATCTGGACGATCCGTTTATCAATATTCCAGACGAT
GCGGATGTGGGACAGTCGGAGAGACTACAGCCTGGAAGAACGGCTAATGA
AATGCTGCAAAACGAACTCCTAACCGAAGAGCACAATTATGCGAAGGAGG
AGTGGCAACTACCCCCGCATCAGTACAAAACGGAAAAGGTGGAGGGAACG
GATGCTGCGCCAGACGCAGCTCCTCCGCCTGCTGATCCCCCTCCTCTTCA
GGATAATATAGACCCTCCCTCGGCCCCCGAACCGCGCTCATGCAAGCCCA
TTGTGACCAATGTAAGCCAGATACCTAACCCAATGATCTGCGAGCTGCTG
CCACAGCCTGCTCCTCCCACGTCGATCAAACCCAACATCGTGGTACTTAA
CGATAGTGTGGTCGAATCCTCAGCGGCTTTTCGGCTTCACAACTGCACTT
TGTGCACTGCCAAATTTATAACAATAGATAGCTTAAATCAGCATTATGCA
CACAGTCACAGTAATTCCACTCCCATGGTTAGTGTTCCTCCGATGAATAT
ATGCCTTCCCAGCTTAACCATGAACCCTCCAATGAAAATGGAAAGCAACA
GAGGTCTTGTGGCCACTGAACAATCCGAATACTGGCCGTTGGAGTGGCAT
AATAGTCCTGTATCCAAGCAACCTAGGAAAAAGATTGATATACTAGATAT
GCAGAGTAGTTTCCTGCATCACAAAGACCTTATACCGACAGCCACTCAAC
TGTCAGCACCCGCACCTGATCCTCAACTGGTTGCAGTGACTGCTAGCTAC
GCTAAACTGGCTAACAGGTATCGTAAGTTGCAGCTGAAATGCAAAAAACT
GAAGTCACCAAGGAAGGTGCACAGAAAAACCTATGTGTGCCGGATGTGCA
GGAAGGGATTTTCAAAGTTTAAGAACTTACACCACCACCGTCGTCAGAAA
GCACACTTTGTAAAGTTAATACCCAATTTTTCAGGACGCTGTTCTGGTTG
CCTAAAGTTTTTTCGATCCCGCTTGGGTCTTCGCCAGCATATGCGATACA
TATGTCAATCGTTGTCGCTCAAAAACCATCGGCGCCTTCAGAGCTTCAAG
TGTCGCCACTGCCAGGCCATCGCCTTTGCCCACTGGCGCCTGTATCGTCG
TCATGAACTCAATTGCAGGCCCAAAAAATCCAAAACTAAGGTGCAGACGG
CAATGAATTCGAAAAAGAAAGTTACGCCCACCCAAGTATTTGAGTGTAAT
ATTTGTAAAAAATCATTCGGTTCGCTCAACGGACTACGCCAGCATAACAT
CACCCACTCGACGGAGCGGCAACACAAGTGCGGCATCTGTGAGCGGGTCT
TCAAGCGACGCAACGGATTGTCTCAACACATTAAGGGCTACCACCTGCAG
CTCAAGCCGCATGAGTGTCCGGTTTGCCAGCATCGCTACGCCCTGAAATG
CGATATGCTGAGGTGCAGGCATTCCCTGCGAAAAGGTCCAGCTGCCGGGG
AGTAAAAGCTTTCTAGACCAT
BS22492.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 12:54:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10431-RB | 2289 | CG10431-PB | 1..2289 | 17..2305 | 11445 | 100 | Plus |
| CG10431-RA | 2289 | CG10431-PA | 1..2289 | 17..2305 | 11445 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 12:55:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10431-RB | 2670 | CG10431-RB | 68..2356 | 17..2305 | 11445 | 100 | Plus |
| CG10431-RA | 3355 | CG10431-RA | 68..2356 | 17..2305 | 11445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 12:54:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 18974903..18977122 | 86..2305 | 11100 | 100 | Plus |
| 2L | 23513712 | 2L | 18974777..18974847 | 17..87 | 355 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 12:54:59 has no hits.
BS22492.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:24 Download gff for
BS22492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..2354 | 17..2303 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:25:33 Download gff for
BS22492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..2354 | 17..2303 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 14:07:17 Download gff for
BS22492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10431-RA | 68..2354 | 17..2303 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 14:07:17 Download gff for
BS22492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 18974777..18974847 | 17..87 | 100 | -> | Plus |
| 2L | 18974905..18977120 | 88..2303 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:25:33 Download gff for
BS22492.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 18974777..18974847 | 17..87 | 100 | -> | Plus |
| arm_2L | 18974905..18977120 | 88..2303 | 100 | | Plus |
BS22492.pep Sequence
Translation from 16 to 2304
> BS22492.pep
MPAHCAVINCSHKYVHAGSISFHRFPFKRKDLLQKWKEFTQRSAQWMPSK
WSALCSRHFGDEDFNCSNNRKTLKKNAVPSIRVSEDDSMSGHLEQVSPSN
RPTHKQTLSSAAESAATGVKATCRFCGSSAINCSSFDKSFELFGMIQKCF
PTLQILQDDTLPKEICQECCLQLERFSQFIDVVMLAQSELQRKYRRQLKI
KQEPLVRVKQEACESLDNLFPDELDMGLEQDDGCDQEETEQKFQFCEFPM
LNAQDIINNCDIMEIINLDDPFINIPDDADVGQSERLQPGRTANEMLQNE
LLTEEHNYAKEEWQLPPHQYKTEKVEGTDAAPDAAPPPADPPPLQDNIDP
PSAPEPRSCKPIVTNVSQIPNPMICELLPQPAPPTSIKPNIVVLNDSVVE
SSAAFRLHNCTLCTAKFITIDSLNQHYAHSHSNSTPMVSVPPMNICLPSL
TMNPPMKMESNRGLVATEQSEYWPLEWHNSPVSKQPRKKIDILDMQSSFL
HHKDLIPTATQLSAPAPDPQLVAVTASYAKLANRYRKLQLKCKKLKSPRK
VHRKTYVCRMCRKGFSKFKNLHHHRRQKAHFVKLIPNFSGRCSGCLKFFR
SRLGLRQHMRYICQSLSLKNHRRLQSFKCRHCQAIAFAHWRLYRRHELNC
RPKKSKTKVQTAMNSKKKVTPTQVFECNICKKSFGSLNGLRQHNITHSTE
RQHKCGICERVFKRRNGLSQHIKGYHLQLKPHECPVCQHRYALKCDMLRC
RHSLRKGPAAGE*
BS22492.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:30:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10431-PB | 762 | CG10431-PB | 1..762 | 1..762 | 4126 | 100 | Plus |
| CG10431-PA | 762 | CG10431-PA | 1..762 | 1..762 | 4126 | 100 | Plus |
| CG6654-PA | 639 | CG6654-PA | 329..513 | 556..749 | 195 | 29.5 | Plus |
| CG15269-PA | 587 | CG15269-PA | 313..498 | 538..735 | 193 | 28 | Plus |
| CG17568-PA | 513 | CG17568-PA | 215..476 | 475..758 | 190 | 25 | Plus |
| CG6654-PA | 639 | CG6654-PA | 415..589 | 533..741 | 168 | 24.6 | Plus |
