Clone BS22507 Report

Search the DGRC for BS22507

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:225
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG34195-RA
Protein status:BS22507.pep: full length peptide match
Sequenced Size:884

Clone Sequence Records

BS22507.complete Sequence

884 bp assembled on 2011-01-25

GenBank Submission: KX804750

> BS22507.complete
GAAGTTATCAGTCGACATGGAACCCCTAGAACCGGACGTTATTACCACCC
AAGCAAAGGAACTGTCGGCGGTGGAGCGACAAAAGTTGGACGAGCAAAAC
AAGCGTGGTCTCGTGCCCGAATACAAAGCGAACAAGTTGGAAATCGATGC
CCAGAGGAACTGGGATATATTCTACAAGCGAAATGAGACTCGTTTCTTTA
AGGACCGCCACTGGACAACGCGTGAGTTCCAGGAGCTGCTGGACCAGGAG
GAGTTCCACGAGAAACGAACACTTTTCGAAGTGGGATGCGGTGTGGGCAA
CCTGGTATTCCCGCTGCTGGAAGAACAAACCAGCGAAGAGGGATGTTTCA
GCAATAGCAGATTCTTCTTCTACGCGTGCGATTTCTCACCGCGAGCAGTG
GAATTCGTGCGCTCCAATCCTCTGTACGATCCCAGCCAGATATCTGCCTT
TCAGTGTGATATCACAACGCAACAGGTGCATGACCACATCCCTCCCAGCA
GCGTGGACATTTGCACGCTGATCTTTGTGCTCTCCGCCATACATCCACAG
AAGTTCAAAGATGTGGTGCAGAACCTGGGAAAGCTACTAAAGCCAGGAGG
ACTGCTTCTGTTTAGGGATTACGGTCTCTACGACATGGCACAGTTGCGCT
TTAAGCCGGGCAACAAGATAGCAGAGAACCTCTATGTAAGACAGGATGGC
ACCCGTAGCTACTTCTTTTCAGAGGAGGAAGTATCCAAGCTGTTTCAGGA
GAACGGCTTTGAGGTCATTACCAATGCCTATGTCCATCGTCGAACTCTAA
ATCTTAAGGAAGGCGTGGATGTGCCGCGCATTTTTCTGCAAGGCAAGTTT
AGGAGGAAAAACCTGTGAAAGCTTTCTAGACCAT

BS22507.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:28:23
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-RA 852 CG34195-PA 1..852 17..868 4260 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:28:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-RA 1184 CG34195-RA 230..1083 15..868 4270 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:28:21
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 17733533..17734382 19..868 4250 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:28:22 has no hits.

BS22507.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:26 Download gff for BS22507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 215..1065 17..867 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:23 Download gff for BS22507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 232..1082 17..867 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:46 Download gff for BS22507.complete
Subject Subject Range Query Range Percent Splice Strand
CG34195-RA 232..1082 17..867 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:46 Download gff for BS22507.complete
Subject Subject Range Query Range Percent Splice Strand
2R 17733532..17734381 17..867 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:23 Download gff for BS22507.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 13621037..13621886 17..867 99   Plus

BS22507.pep Sequence

Translation from 16 to 867

> BS22507.pep
MEPLEPDVITTQAKELSAVERQKLDEQNKRGLVPEYKANKLEIDAQRNWD
IFYKRNETRFFKDRHWTTREFQELLDQEEFHEKRTLFEVGCGVGNLVFPL
LEEQTSEEGCFSNSRFFFYACDFSPRAVEFVRSNPLYDPSQISAFQCDIT
TQQVHDHIPPSSVDICTLIFVLSAIHPQKFKDVVQNLGKLLKPGGLLLFR
DYGLYDMAQLRFKPGNKIAENLYVRQDGTRSYFFSEEEVSKLFQENGFEV
ITNAYVHRRTLNLKEGVDVPRIFLQGKFRRKNL*

BS22507.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG34195-PA 283 CG34195-PA 1..283 1..283 1493 100 Plus
metl-PA 302 CG13929-PA 51..300 27..280 480 39.7 Plus
metl-PB 325 CG13929-PB 74..323 27..280 480 39.7 Plus