BS22507.complete Sequence
884 bp assembled on 2011-01-25
GenBank Submission: KX804750
> BS22507.complete
GAAGTTATCAGTCGACATGGAACCCCTAGAACCGGACGTTATTACCACCC
AAGCAAAGGAACTGTCGGCGGTGGAGCGACAAAAGTTGGACGAGCAAAAC
AAGCGTGGTCTCGTGCCCGAATACAAAGCGAACAAGTTGGAAATCGATGC
CCAGAGGAACTGGGATATATTCTACAAGCGAAATGAGACTCGTTTCTTTA
AGGACCGCCACTGGACAACGCGTGAGTTCCAGGAGCTGCTGGACCAGGAG
GAGTTCCACGAGAAACGAACACTTTTCGAAGTGGGATGCGGTGTGGGCAA
CCTGGTATTCCCGCTGCTGGAAGAACAAACCAGCGAAGAGGGATGTTTCA
GCAATAGCAGATTCTTCTTCTACGCGTGCGATTTCTCACCGCGAGCAGTG
GAATTCGTGCGCTCCAATCCTCTGTACGATCCCAGCCAGATATCTGCCTT
TCAGTGTGATATCACAACGCAACAGGTGCATGACCACATCCCTCCCAGCA
GCGTGGACATTTGCACGCTGATCTTTGTGCTCTCCGCCATACATCCACAG
AAGTTCAAAGATGTGGTGCAGAACCTGGGAAAGCTACTAAAGCCAGGAGG
ACTGCTTCTGTTTAGGGATTACGGTCTCTACGACATGGCACAGTTGCGCT
TTAAGCCGGGCAACAAGATAGCAGAGAACCTCTATGTAAGACAGGATGGC
ACCCGTAGCTACTTCTTTTCAGAGGAGGAAGTATCCAAGCTGTTTCAGGA
GAACGGCTTTGAGGTCATTACCAATGCCTATGTCCATCGTCGAACTCTAA
ATCTTAAGGAAGGCGTGGATGTGCCGCGCATTTTTCTGCAAGGCAAGTTT
AGGAGGAAAAACCTGTGAAAGCTTTCTAGACCAT
BS22507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:28:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-RA | 852 | CG34195-PA | 1..852 | 17..868 | 4260 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:28:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-RA | 1184 | CG34195-RA | 230..1083 | 15..868 | 4270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:28:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 17733533..17734382 | 19..868 | 4250 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:28:22 has no hits.
BS22507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:17:26 Download gff for
BS22507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 215..1065 | 17..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:53:23 Download gff for
BS22507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 232..1082 | 17..867 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:13:46 Download gff for
BS22507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG34195-RA | 232..1082 | 17..867 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:13:46 Download gff for
BS22507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 17733532..17734381 | 17..867 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:53:23 Download gff for
BS22507.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 13621037..13621886 | 17..867 | 99 | | Plus |
BS22507.pep Sequence
Translation from 16 to 867
> BS22507.pep
MEPLEPDVITTQAKELSAVERQKLDEQNKRGLVPEYKANKLEIDAQRNWD
IFYKRNETRFFKDRHWTTREFQELLDQEEFHEKRTLFEVGCGVGNLVFPL
LEEQTSEEGCFSNSRFFFYACDFSPRAVEFVRSNPLYDPSQISAFQCDIT
TQQVHDHIPPSSVDICTLIFVLSAIHPQKFKDVVQNLGKLLKPGGLLLFR
DYGLYDMAQLRFKPGNKIAENLYVRQDGTRSYFFSEEEVSKLFQENGFEV
ITNAYVHRRTLNLKEGVDVPRIFLQGKFRRKNL*
BS22507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:11:10
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG34195-PA | 283 | CG34195-PA | 1..283 | 1..283 | 1493 | 100 | Plus |
metl-PA | 302 | CG13929-PA | 51..300 | 27..280 | 480 | 39.7 | Plus |
metl-PB | 325 | CG13929-PB | 74..323 | 27..280 | 480 | 39.7 | Plus |