BS22510.complete Sequence
1928 bp assembled on 2011-02-18
GenBank Submission: KX802859
> BS22510.complete
GAAGTTATCAGTCGACATGAGCACCTGGAATCCGGAGAACGATGTGGACC
TGCTGTCTGGGTCCGAGGACGAGGAGGATGTGTCCATGAAGCGGGACTAC
CATGGGCGCGAGGCCATTCTGTTCGTGGTAGACGCCAATCTTCAGACAGC
CGGCGTGGAGCGCCTGTTGGAGGCACTGAACATCATCCGGACGGCCTTTA
TATCCGGACTTCTGGTTAACGACAAGGACCTCATCGGACTCATCTTCGCC
AACACCAAGCACAGTCCGCCGCCGCTGGAAGCCAGTGCATTGGACAACAT
CGTAATGCCGGATAACTGCGCAGTGTTCTTGCCCCTTCGCCAACTAACCA
AACCCATTGTGGAGCACTATCTGGAATTCATGGGCGGGGTGGAGACGCAG
TTCGCCGATGTGTATGGCCTGGCGGAACCCGATGGTCGCGGCAGGTTTGA
CCTTATGATCCGGCTCTGCATCGAGATGCTGGAAAAGTGCGGCAAGAAGC
TAAACAACGCCAAGATCGCCTATGTCACGGACGTCAGGGAACCTCATCCA
TCGAACAGCAATCACTTCCAGGCTGCCCTGCAAAAGGCCAGCGATCTGGA
GGGCAAGGAGTTCGAGTTTCATGTCATTCCCATGGTCGATGACTTTGACT
ACGAGCCGTTTTACAAGGAGTTCATCACGTTGTCAAGAGCTATCGAACTG
GACGCCTTCCAGGTGCCAGATGCCCAGATGCTGCGCGAAATCCTGTCCGA
TCGTAAGTTGAAGCAGGATTTCCTTCGCCGATGCCTGGGCCACTTCAGTT
TTTATCTGGGCCCCAACCTATCCATGTCCGTACAGTACTACAATTACTTT
CAGCGACGCGCCTATCCGCGCAAAGTGCAAATCCTGCGCAGGGACAACAG
TGTGGTGCGTACTAAGCGAGTGATTACGGTGCAAAAACAAAAGGACGATG
GCTCGCAGGATATCGAGCACGAGTATCAGATTAAGGTGACGGGCGGTTGG
TACACTTGCAACGTGGGCGAAAGGGATCTGCGCATCAGCATGGATCAGTT
GAACAGGGTGCGCAATCTGCACAAGCCGCAAATGATGCTGCTGGGCTTCA
AGCATCGATCCTCTCTTCCCGAAGTTAGCTACATCAAGCCAGCGAATTTC
ATGTACCCCGATGATCAGAGCATCATCGGATCGAAGCGCTTGTTCCGCGC
ATTGTGGGAACGATGCTTGGTGCGCGACAAGATTGCCATTTGCCTGTTCA
TGTGCAAGCGCAAGTCGATACCTCGCTATGTGGCACTTGTGCCAGTAGAG
GCCCCAGATAATGGGGAAGATAAGAACTATCGCTCTCTGCTCTGCGGTGA
CGGATTCAAGATTGTCTACTTGCCGGAGGCCAAGCACATCCGCCACCTAG
ACTTGCAGGACTGGAACAATACGGAAAACACTGCTGACGAACAGAAAGTC
GAGTTTTTCCAAAAGATCATCAAGAAGCTGCGCGTTGACTATCAGCCGAA
TCTCATCAACGATCCAAGTCTGGACGCCCTGCAGGCGAATCTTCTGGCCC
TCTCCCTGGACTTTTCGACAGATACTAAAGGACTCGATAATCTGCTGGAC
ACTTCGCAACAGGACAAGCGCATAGAAAAGCTGCTGCCGGACTATGAAAT
GTTCGCTCCGGAAGCAGAACCCCATAAGAAGCGAGCAGCCAAGTCCACCA
CAGCGGGAGCGAGCGGTCCCAAAATGGCCAAGATCGATGATGATCAACTC
AAGGAATTCGAATTCGTAAAGAGCCTGAACAAGGATGAGGCTCTGACGAG
TTGCACGGCCGCCCAGTTGCATTTTATTCTGCAGCATCACTTCGATGTTA
CAATGCCCAAGTCGTCAAAGAAGGCAAAACTGGTCGCCAAAATCGAGGAA
CTACATAAGTAAAAGCTTTCTAGACCAT
BS22510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:30:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Irbp-RA | 1896 | CG5247-PA | 1..1896 | 17..1912 | 9480 | 100 | Plus |
| Irbp-RB | 798 | CG5247-PB | 1..736 | 17..752 | 3680 | 100 | Plus |
| Irbp-RB | 798 | CG5247-PB | 737..798 | 854..915 | 310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:30:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Irbp-RA | 2149 | CG5247-RA | 92..1987 | 17..1912 | 9480 | 100 | Plus |
| Irbp-RB | 2048 | CG5247-RB | 828..1886 | 854..1912 | 5295 | 100 | Plus |
| Irbp-RB | 2048 | CG5247-RB | 92..827 | 17..752 | 3680 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:30:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 11411054..11412278 | 688..1912 | 6125 | 100 | Plus |
| 3R | 32079331 | 3R | 11410138..11410810 | 17..689 | 3365 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 15:30:42 has no hits.
BS22510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:40:49 Download gff for
BS22510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Irbp-RA | 91..1984 | 17..1910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:54:04 Download gff for
BS22510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Irbp-RA | 92..1985 | 17..1910 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:14:37 Download gff for
BS22510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Irbp-RA | 92..1985 | 17..1910 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:14:37 Download gff for
BS22510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 11410138..11410810 | 17..689 | 100 | -> | Plus |
| 3R | 11411056..11412276 | 690..1910 | 100 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:54:04 Download gff for
BS22510.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 7235860..7236532 | 17..689 | 100 | -> | Plus |
| arm_3R | 7236778..7237998 | 690..1910 | 100 | | Plus |
BS22510.pep Sequence
Translation from 16 to 1911
> BS22510.pep
MSTWNPENDVDLLSGSEDEEDVSMKRDYHGREAILFVVDANLQTAGVERL
LEALNIIRTAFISGLLVNDKDLIGLIFANTKHSPPPLEASALDNIVMPDN
CAVFLPLRQLTKPIVEHYLEFMGGVETQFADVYGLAEPDGRGRFDLMIRL
CIEMLEKCGKKLNNAKIAYVTDVREPHPSNSNHFQAALQKASDLEGKEFE
FHVIPMVDDFDYEPFYKEFITLSRAIELDAFQVPDAQMLREILSDRKLKQ
DFLRRCLGHFSFYLGPNLSMSVQYYNYFQRRAYPRKVQILRRDNSVVRTK
RVITVQKQKDDGSQDIEHEYQIKVTGGWYTCNVGERDLRISMDQLNRVRN
LHKPQMMLLGFKHRSSLPEVSYIKPANFMYPDDQSIIGSKRLFRALWERC
LVRDKIAICLFMCKRKSIPRYVALVPVEAPDNGEDKNYRSLLCGDGFKIV
YLPEAKHIRHLDLQDWNNTENTADEQKVEFFQKIIKKLRVDYQPNLINDP
SLDALQANLLALSLDFSTDTKGLDNLLDTSQQDKRIEKLLPDYEMFAPEA
EPHKKRAAKSTTAGASGPKMAKIDDDQLKEFEFVKSLNKDEALTSCTAAQ
LHFILQHHFDVTMPKSSKKAKLVAKIEELHK*
BS22510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:24:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Irbp-PA | 631 | CG5247-PA | 1..631 | 1..631 | 3289 | 100 | Plus |
| Irbp-PB | 265 | CG5247-PB | 1..245 | 1..245 | 1268 | 100 | Plus |
