Clone BS22511 Report

Search the DGRC for BS22511

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:225
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG13183-RA
Protein status:BS22511.pep: full length peptide match
Sequenced Size:1328

Clone Sequence Records

BS22511.complete Sequence

1328 bp assembled on 2011-01-25

GenBank Submission: KX805331

> BS22511.complete
GAAGTTATCAGTCGACATGATTTCTCGCCGCAAGATCATATCGCGCTCCC
TAGACAATTTGGATGCCATCGGGCAGGAAGAGCAGGAGGAAGACGTCTGG
CACGATCGCGAAAAGCTCTTCAGGGATCACATCAACGAGGTTCTGTCCAA
GTGGGAGCAAATCGACGACGAGATCTGGGCCAAGATAATTGTCTTCGAGA
AAAATCGGCGAGTGGCCAAGGCCTACGCCCGCTCCTCTGTGATAACCATA
AATGGATCTAAGAATGGATTCGATGGAGTGCGTATTGGGCTGAATGGCTT
CGATAATCCGATGCGCGATGCGGAGACGAAGGTGATCAAAAAGTCCATCG
GCGATGGATTCAAGATCAAAATGGACGACACCGGCAACATATTCATCAAG
CGGTATGGCAAGAGCAGCATCTACGTGAACAGCACATCGCAGGGCAACGA
GGAGACGGTGATCGGTGGCGACATAATCCAAATGCCGCAGATGTCCCTCA
CCGCGGCCACCTCCGCTCGACTCTTTGATATGAAGAAGTTCCAGACGAAC
ATAAACCGCGAGTTTGCCCGCACTTATCCGGAGCGCGGAAGACTGGAACG
GCAGTGCCTGTCCGCCGTATCGCTTGTCAAGTCGAACAACAATCTTATCA
ACTCTCCGGTCTGGATACTCGTGGTCAACGTGGTGGCCATGGACATGCTG
AGGAGCCGCCTCCAAACGATTCCCAAGTCACTGGATGCGATGGGCATGCG
AGTGCCGCTGACGAACAGCAGCGAGGATCCATACTCCACCATCGAAAGCC
AAGTGGGATTGATCTATCCTACGCCCGCCGCGTCGGATGATTCCCAGAAC
TCCCAGCACTCGAGCAACTCCAGCAAGGGACGGCGCAGCATCTTTAGTGC
CGCCTTCCTCAACGAGGGTCCATATGTGCCCAAGCCCGACTACGAATCTG
GCGGATCTTTGACGCCCATATATGCGGACAAGAAGCGACAGAAGAGCAGC
GGGTCGCAGCAGCGGAAGAAGCAGGATGATCCGTACTACTGCGGACTCTT
GGCGCGTATTCCCAACTTCATCAAGTCCTCGAAGCAGCCGTGCCCTGGAG
GAGCCAGCAAGCCCAAGAAGGAGCCAAAGATCTCGCGGAAGATCTCGGCA
CAGCACCAGCAACAGCAGTTCCTGCAGCCGGCGCAACCCATTCCCATTGC
CACATTCCACCACTCGTACTTCCCCTACAAACTGTATCCACCGCAGCACC
GTCTCTCCCAGTCGCAAATGTCCCTCTGGGATGCACGTAGTCTGATCAGC
GCACATGAATGAAAGCTTTCTAGACCAT

BS22511.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 16:37:08
Subject Length Description Subject Range Query Range Score Percent Strand
CG13183-RA 1296 CG13183-PA 1..1296 17..1312 6480 100 Plus
CG13188-RB 1542 CG13188-PB 151..422 158..429 325 74.6 Plus
CG13188-RA 3078 CG13188-PA 151..422 158..429 325 74.6 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:37:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG13183-RA 2211 CG13183-RA 399..1694 17..1312 6480 100 Plus
CG13188-RB 2842 CG13188-RB 857..1128 158..429 325 74.6 Plus
CG13188-RA 4532 CG13188-RA 857..1128 158..429 325 74.6 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 16:37:05
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 11905395..11906047 934..282 3265 100 Minus
2R 25286936 2R 11904906..11905280 1307..933 1875 100 Minus
2R 25286936 2R 11906109..11906267 282..124 795 100 Minus
2R 25286936 2R 11906339..11906447 125..17 545 100 Minus
2R 25286936 2R 11955618..11955718 158..258 235 82.2 Plus
Blast to na_te.dros performed on 2014-11-26 16:37:06 has no hits.

BS22511.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:33 Download gff for BS22511.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 395..1689 17..1311 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:01:16 Download gff for BS22511.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 399..1693 17..1311 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 17:08:38 Download gff for BS22511.complete
Subject Subject Range Query Range Percent Splice Strand
CG13183-RA 399..1693 17..1311 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 17:08:38 Download gff for BS22511.complete
Subject Subject Range Query Range Percent Splice Strand
2R 11906340..11906447 17..124 100   Minus
2R 11904899..11905278 935..1311 99 <- Minus
2R 11905395..11906046 283..934 100 <- Minus
2R 11906109..11906266 125..282 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:01:16 Download gff for BS22511.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 7792404..7792783 935..1311 99 <- Minus
arm_2R 7792900..7793551 283..934 100 <- Minus
arm_2R 7793614..7793771 125..282 100 <- Minus
arm_2R 7793845..7793952 17..124 100   Minus

BS22511.pep Sequence

Translation from 16 to 1311

> BS22511.pep
MISRRKIISRSLDNLDAIGQEEQEEDVWHDREKLFRDHINEVLSKWEQID
DEIWAKIIVFEKNRRVAKAYARSSVITINGSKNGFDGVRIGLNGFDNPMR
DAETKVIKKSIGDGFKIKMDDTGNIFIKRYGKSSIYVNSTSQGNEETVIG
GDIIQMPQMSLTAATSARLFDMKKFQTNINREFARTYPERGRLERQCLSA
VSLVKSNNNLINSPVWILVVNVVAMDMLRSRLQTIPKSLDAMGMRVPLTN
SSEDPYSTIESQVGLIYPTPAASDDSQNSQHSSNSSKGRRSIFSAAFLNE
GPYVPKPDYESGGSLTPIYADKKRQKSSGSQQRKKQDDPYYCGLLARIPN
FIKSSKQPCPGGASKPKKEPKISRKISAQHQQQQFLQPAQPIPIATFHHS
YFPYKLYPPQHRLSQSQMSLWDARSLISAHE*

BS22511.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:08:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG13183-PA 431 CG13183-PA 1..431 1..431 2230 100 Plus
CG13188-PB 513 CG13188-PB 1..472 1..425 913 43.5 Plus
CG13188-PA 1025 CG13188-PA 1..472 1..425 913 43.5 Plus