BS22521.complete Sequence
2423 bp assembled on 2011-02-18
GenBank Submission: KX804019
> BS22521.complete
GAAGTTATCAGTCGACATGAAAGTGTGTCTGGTTTTCCCGTTTATTCTTT
GGCTTTGGGGAACACCTGGTGTAGATGTGCTTTCAATCAAAGGACCTTCT
AGTGTTGGATGGAATAATGTCAACCAAAATGTCATATTATCATTTTCGAA
ACGCAACTCACATGAGTGCGTAGTGTCCTCGCAACAAAATTCCACGTACT
GTGAATCATTATCGAATGGATTTTATGAATATCCTTACAACTGCAGCGCA
TATATAACGTGTTATGATTCTTGTGCCGATTTGGAGTACTGTCCCGATGG
AAAACTTTTCAACAGTCCTTTGCAAATTTGCGATACACCAGGGGCCGTCG
ACTGCGAACCGTTGCCATATCCAACACCTTCACCCACAGAATCTCCACCG
GAAAATCCTTGTTTGGGCACAAGAAACAACACTTTGCTACCCTCCGCGGA
AAATTGTAATGAGTTCTACTTGTGCGTGAATGACCAAAGTAAAGTTTATC
GGTGTCCTGGTGAGATGCTTTTCAATCCGGATTTGAATATTTGCGATGAT
AAGGATAATGTGTGGTGCTATGGTGACCGTACTACTCCAGATCCGTTGGA
TACCACAACGCCTGCTGAGGAGTCCTTCACGAAGTGCGAGGATCAAGAGA
AAGGAACATTCTTTCCAGACCCTGAAAACTGTCAGCAATACTACTACTGC
TGGGGCAACAAATCATACACAATTTTACCATGCCCCGTTGACAATTGGTT
TAACCCGATCAGCGGCAACTGCGGTCCCGATATAGCACCAGATGCTTGCC
GAGAAACCACGCCAACATCGACACCAACTATTGATACTTCATCATCAACA
ACTGTTGCCCCAACATCGACGGAAGATAGTGTTGGTAATCCATGTGCAGA
TCAAGAACTGGGTGCTAGCTTTCCAATAAAATCCGACTGTCAGTCGTACC
TTCTATGCCTGAATAATGGTGAATCAACGACTGCAAAATGCCCATCGAAT
GCGTGGTTCGATCCAAAGACTGGTGATTGCGGTCCAAATGTATCACCCAC
CGCTTGTCTAGAATCCTTCGAAACTACCACGACTGCTGTAACAACACAAG
CGCCGAAGGATCCTTGTGCCGATCAAGAACTTGGAACATCCTATCCACTT
GTCACAAATTGTCAGCAATATATTCTCTGTATGGGAAACGGAGAGTCCAC
CGTTGCGAATTGCATTTATAACTCCTGGTTCGATCCGCAAACTGGAAATT
GTGGTCCCGATGTGTCTCCGACTGCGTGTAAGGAATCCGGAGTTACCACC
GCGTCCCCCACCACCACAAGTCAAGCCACCTCTCCGCTCACAACACCATC
GCCCACATGGTCGACTTTGCCTACTGCAAATACCGAGGAAACAACTACAA
ATCCTCCGGATATTGTGGGCATTTGTTCGGGAGAGAGTGATGGATACTAT
GCCACGTATCCCGAGGTATGCAACAAATACATATTGTGTGCTAGTCCTGT
TCCCATTGCATTTTACTGTCCAGAGAGCTTGTTTTTCAACGAGGCTCTCC
AGAGATGTGTGGAGTGGGAATCTAGCGATTGTTCCAATGGAGAGACCACA
ACATCATCGCCGGGATTTACAACTCCTAGCCCTGATACTCAAATCTGTTC
CAACAGCACTGGCCTCAATTTGCCTTACCAAGAAAACTGCCAATGGTATA
TTTATTGCACAGACGAGAATTCGTATATGATGGGTATATGTGGCAGTGAG
GAATATTTCGATCCGTGGACTGGGAAATGTGGTTTTGGTGTTTCACCCGA
GGCATGTCGTGAAATCCAAACTACATCCCCCACAGTTACAGATAGCACAG
AAGGTCCAACCACGGTAATAACACCAAGTACTCCGGGCTCAGAACCAGAT
CCATGTGATGGAGCTCCTGAGGGAAAACTAGTTCCCTATCCGGATGACTG
CTCCAAGTTTATACAATGTATTCAACCCGATCCTATCGTTTATGACTGTC
GCGAGGGTCAGGAATTTAGTGCCGCATTGGAAAGGTGTATGGCTCCTTGG
TTTGCAAACTGTTCTATTCCAGCTACAACAATCCCACCCGTAACTATTCC
TACTACCACAACAACGACAGAGAAGCCTTCACCGAATGGAATTTGTGCAG
ATAAGGCAGAGGGATCACTGGTGCCCTATCCTGGGAACTGTAGCAAGTAC
ATTGCTTGTGAAGACCCCATTCCGGTGGGTTATGCGTGCCCGGAGGGAGA
AGAATTTAATCCCATCATTCTTACCTGTACGGATCCTCACCTGGCTGGCT
GCAATCCAAGTGCTTTGCACATTTCACCGAAAACCGAATCAGATGATTTA
GGGTTTTCTTTATGGCAGTCCTTAAAAACGATTGCAAGTTTTGTTACAGA
ATTGTAAAAGCTTTCTAGACCAT
BS22521.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 08:23:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7248-RA | 2391 | CG7248-PA | 1..2391 | 17..2407 | 11925 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 08:23:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7248-RA | 2611 | CG7248-RA | 163..2553 | 17..2407 | 11925 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 08:23:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11954337..11956722 | 22..2407 | 11900 | 99.9 | Plus |
Blast to na_te.dros performed on 2014-11-27 08:23:20 has no hits.
BS22521.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-02-18 10:39:45 Download gff for
BS22521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7248-RA | 160..2548 | 17..2405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 08:10:12 Download gff for
BS22521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7248-RA | 163..2551 | 17..2405 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:17:24 Download gff for
BS22521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7248-RA | 163..2551 | 17..2405 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 09:17:24 Download gff for
BS22521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11954333..11956720 | 17..2405 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 08:10:12 Download gff for
BS22521.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11947433..11949820 | 17..2405 | 99 | | Plus |
BS22521.pep Sequence
Translation from 16 to 2406
> BS22521.pep
MKVCLVFPFILWLWGTPGVDVLSIKGPSSVGWNNVNQNVILSFSKRNSHE
CVVSSQQNSTYCESLSNGFYEYPYNCSAYITCYDSCADLEYCPDGKLFNS
PLQICDTPGAVDCEPLPYPTPSPTESPPENPCLGTRNNTLLPSAENCNEF
YLCVNDQSKVYRCPGEMLFNPDLNICDDKDNVWCYGDRTTPDPLDTTTPA
EESFTKCEDQEKGTFFPDPENCQQYYYCWGNKSYTILPCPVDNWFNPISG
NCGPDIAPDACRETTPTSTPTIDTSSSTTVAPTSTEDSVGNPCADQELGA
SFPIKSDCQSYLLCLNNGESTTAKCPSNAWFDPKTGDCGPNVSPTACLES
FETTTTAVTTQAPKDPCADQELGTSYPLVTNCQQYILCMGNGESTVANCI
YNSWFDPQTGNCGPDVSPTACKESGVTTASPTTTSQATSPLTTPSPTWST
LPTANTEETTTNPPDIVGICSGESDGYYATYPEVCNKYILCASPVPIAFY
CPESLFFNEALQRCVEWESSDCSNGETTTSSPGFTTPSPDTQICSNSTGL
NLPYQENCQWYIYCTDENSYMMGICGSEEYFDPWTGKCGFGVSPEACREI
QTTSPTVTDSTEGPTTVITPSTPGSEPDPCDGAPEGKLVPYPDDCSKFIQ
CIQPDPIVYDCREGQEFSAALERCMAPWFANCSIPATTIPPVTIPTTTTT
TEKPSPNGICADKAEGSLVPYPGNCSKYIACEDPIPVGYACPEGEEFNPI
ILTCTDPHLAGCNPSALHISPKTESDDLGFSLWQSLKTIASFVTEL*
BS22521.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:24:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7248-PA | 796 | CG7248-PA | 1..796 | 1..796 | 4485 | 100 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 36..839 | 49..720 | 1018 | 32.6 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 272..985 | 61..701 | 906 | 32 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 494..1212 | 70..755 | 551 | 27.3 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 225..933 | 75..757 | 377 | 23.4 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 225..933 | 75..757 | 377 | 23.4 | Plus |
| CG43896-PC | 2113 | CG43896-PC | 225..933 | 75..757 | 377 | 23.4 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 40..582 | 73..748 | 356 | 21.8 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 40..582 | 73..748 | 356 | 21.8 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 356..991 | 73..754 | 329 | 22.3 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 356..991 | 73..754 | 329 | 22.3 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 96..729 | 62..782 | 320 | 20.6 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 96..729 | 62..782 | 320 | 20.6 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 51..554 | 367..777 | 296 | 24.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1243..1864 | 47..754 | 295 | 20.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1298..2030 | 54..754 | 293 | 21.6 | Plus |
| CG4835-PB | 1224 | CG4835-PB | 744..1219 | 62..522 | 290 | 25.5 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1622..2099 | 127..682 | 260 | 21.5 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 431..1114 | 75..754 | 258 | 21.9 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 431..1114 | 75..754 | 258 | 21.9 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 1356..2106 | 46..778 | 236 | 19.1 | Plus |
| CG43896-PB | 1324 | CG43896-PB | 7..463 | 278..756 | 204 | 22.6 | Plus |
| CG43896-PD | 2113 | CG43896-PD | 7..463 | 278..756 | 204 | 22.6 | Plus |
