Clone BS22543 Report

Search the DGRC for BS22543

Clone and Library Details

Library:BS
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with native stop reading frames
Original Plate Number:225
Well:43
Vector:pDNR-Dual
Associated Gene/TranscriptCG14453-RA
Protein status:BS22543.pep: gold
Sequenced Size:434

Clone Sequence Records

BS22543.complete Sequence

434 bp assembled on 2011-01-25

GenBank Submission: KX803503

> BS22543.complete
GAAGTTATCAGTCGACATGCGATTCATATTTGTTCTGCTCTTGGCCCTTC
TCGGCTGCCTCCTGTTTGCCCAGCAGGGCTGCGAAGCTACGGGAACGAGC
ACTGAAAGCTCCTCGGATAGTACCAGCGCCTCGGACACCTCCACTACCGC
GTCCTCTTCCTCCGACACAACTGAAGCCTCAACGTCTTCCGACACCACCA
CAGTGGCCTCGTCTGCCACGACTACCACCACTTCTTCGTCCTCGTCCTCG
TCGTCGTCCTCCAGCGCGGCCGCCCGTCGTCGCAGGGCCGCCGCCCGTCG
TCGTCGCTTGGCCCGCCAACGGCGCAGGCGCCAACAGCGCCAAAGGCGCC
AACAGCGCCAAAGGCGCCGCCGCCAACAGCAGCGCAGAAGACGCCAGCAA
AGGCAGCGCAGTGGATAGAAGCTTTCTAGACCAT

BS22543.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:46:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-RA 402 CG14453-PA 1..402 17..418 2010 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:46:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-RA 566 CG14453-RA 20..422 17..419 2015 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:46:22
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 22694102..22694504 17..419 2015 100 Plus
Blast to na_te.dros performed on 2014-11-26 15:46:23 has no hits.

BS22543.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-09 09:37:37 Download gff for BS22543.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 8..409 17..418 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:57:32 Download gff for BS22543.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 20..421 17..418 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:19:58 Download gff for BS22543.complete
Subject Subject Range Query Range Percent Splice Strand
CG14453-RA 20..421 17..418 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:19:58 Download gff for BS22543.complete
Subject Subject Range Query Range Percent Splice Strand
3L 22694102..22694503 17..418 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:57:32 Download gff for BS22543.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 22687202..22687603 17..418 100   Plus

BS22543.pep Sequence

Translation from 16 to 417

> BS22543.pep
MRFIFVLLLALLGCLLFAQQGCEATGTSTESSSDSTSASDTSTTASSSSD
TTEASTSSDTTTVASSATTTTTSSSSSSSSSSSAAARRRRAAARRRRLAR
QRRRRQQRQRRQQRQRRRRQQQRRRRQQRQRSG*

BS22543.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 19:08:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG14453-PA 133 CG14453-PA 1..133 1..133 629 100 Plus
CG32453-PB 120 CG32453-PB 1..120 1..133 294 54.4 Plus
CG32453-PA 120 CG32453-PA 1..120 1..133 294 54.4 Plus
CG14454-PB 120 CG14454-PB 1..120 1..133 294 54.4 Plus
CG14454-PA 120 CG14454-PA 1..120 1..133 294 54.4 Plus