BS22554.complete Sequence
488 bp assembled on 2011-01-25
GenBank Submission: KX806384
> BS22554.complete
GAAGTTATCAGTCGACATGAAAACACTGGAGAAATATATCCTATTCGCCA
TCGTGCTCTGCTGCCTGCTGCAATTGGGCCAGGCGATCAAATGTTGGGAC
TGTCGCAGCGATAACGATCCCAAATGCGGGGATCCTTTTGACAACAGCAC
GCTGGCCATCACCGATTGCCAACAGGCGCCGGAGCTGGAGCATCTGAAGG
GCGTGCGACCGACAATGTGTCGCAAGATCCGGCAGAAGGTGCACGGTGAA
TGGCGCTACTTTCGCAGCTGCGCCTACATGGGCGAGCCGGGCATCGAGGG
CGACGAACGCTTCTGCCTGATGCGCACTGGCAGCTACAACATCTTCATGG
AGTTCTGCACGTGCAACAGCAAGGACGGCTGCAACTCGGCGGGCATCCAT
AGGCTAGGACTGATGGGCGTCCTAACTGGCACACTGCTCTCGGTGATTGT
GGCTCATCTTCTGCGGCAATAGAAGCTTTCTAGACCAT
BS22554.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 14:59:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-RA | 456 | CG17218-PA | 1..456 | 17..472 | 2280 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 14:59:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-RA | 1033 | CG17218-RA | 90..545 | 17..472 | 2280 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 14:59:35
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 12173208..12173603 | 77..472 | 1980 | 100 | Plus |
2L | 23513712 | 2L | 12173070..12173131 | 17..78 | 310 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-26 14:59:36 has no hits.
BS22554.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-01-25 17:16:48 Download gff for
BS22554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
crok-RA | 87..542 | 17..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:46:34 Download gff for
BS22554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
crok-RA | 90..545 | 17..472 | 100 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:04:16 Download gff for
BS22554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
crok-RA | 90..545 | 17..472 | 100 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:04:16 Download gff for
BS22554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 12173209..12173603 | 78..472 | 100 | | Plus |
2L | 12173070..12173130 | 17..77 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:46:34 Download gff for
BS22554.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 12173070..12173130 | 17..77 | 100 | -> | Plus |
arm_2L | 12173209..12173603 | 78..472 | 100 | | Plus |
BS22554.pep Sequence
Translation from 16 to 471
> BS22554.pep
MKTLEKYILFAIVLCCLLQLGQAIKCWDCRSDNDPKCGDPFDNSTLAITD
CQQAPELEHLKGVRPTMCRKIRQKVHGEWRYFRSCAYMGEPGIEGDERFC
LMRTGSYNIFMEFCTCNSKDGCNSAGIHRLGLMGVLTGTLLSVIVAHLLR
Q*
BS22554.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 13:09:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
crok-PA | 151 | CG17218-PA | 1..151 | 1..151 | 831 | 100 | Plus |
CG6329-PF | 155 | CG6329-PF | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PE | 155 | CG6329-PE | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PD | 155 | CG6329-PD | 5..122 | 4..125 | 255 | 39.8 | Plus |
CG6329-PB | 155 | CG6329-PB | 5..122 | 4..125 | 255 | 39.8 | Plus |